Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05364 and H281DRAFT_05365 are separated by 72 nucleotides H281DRAFT_05365 and H281DRAFT_05366 are separated by 83 nucleotides H281DRAFT_05366 and H281DRAFT_05367 are separated by 111 nucleotides
H281DRAFT_05364: H281DRAFT_05364 - type VI secretion system protein ImpC, at 116,929 to 118,419
_05364
H281DRAFT_05365: H281DRAFT_05365 - type VI secretion system secreted protein Hcp, at 118,492 to 118,995
_05365
H281DRAFT_05366: H281DRAFT_05366 - type VI secretion system protein ImpF, at 119,079 to 119,558
_05366
H281DRAFT_05367: H281DRAFT_05367 - type VI secretion system protein ImpG, at 119,670 to 121,508
_05367
Position (kb) 118
119 Strain fitness (log2 ratio) -1
0
1 at 117.637 kb on + strand, within H281DRAFT_05364 at 117.638 kb on - strand, within H281DRAFT_05364 at 117.747 kb on + strand, within H281DRAFT_05364 at 117.747 kb on + strand, within H281DRAFT_05364 at 117.754 kb on + strand, within H281DRAFT_05364 at 117.754 kb on + strand, within H281DRAFT_05364 at 117.754 kb on + strand, within H281DRAFT_05364 at 117.754 kb on + strand, within H281DRAFT_05364 at 117.937 kb on - strand, within H281DRAFT_05364 at 118.006 kb on + strand, within H281DRAFT_05364 at 118.051 kb on + strand, within H281DRAFT_05364 at 118.102 kb on + strand, within H281DRAFT_05364 at 118.102 kb on + strand, within H281DRAFT_05364 at 118.220 kb on - strand, within H281DRAFT_05364 at 118.418 kb on - strand at 118.691 kb on + strand, within H281DRAFT_05365 at 118.709 kb on - strand, within H281DRAFT_05365 at 118.709 kb on - strand, within H281DRAFT_05365 at 118.802 kb on + strand, within H281DRAFT_05365 at 118.803 kb on - strand, within H281DRAFT_05365 at 118.813 kb on + strand, within H281DRAFT_05365 at 118.813 kb on + strand, within H281DRAFT_05365 at 118.885 kb on + strand, within H281DRAFT_05365 at 118.885 kb on + strand, within H281DRAFT_05365 at 118.886 kb on - strand, within H281DRAFT_05365 at 118.886 kb on - strand, within H281DRAFT_05365 at 118.984 kb on + strand at 118.985 kb on - strand at 118.985 kb on - strand at 119.058 kb on + strand at 119.059 kb on - strand at 119.283 kb on + strand, within H281DRAFT_05366 at 119.283 kb on + strand, within H281DRAFT_05366 at 119.284 kb on - strand, within H281DRAFT_05366 at 119.284 kb on - strand, within H281DRAFT_05366 at 119.284 kb on - strand, within H281DRAFT_05366 at 119.284 kb on - strand, within H281DRAFT_05366 at 119.326 kb on - strand, within H281DRAFT_05366 at 119.386 kb on + strand, within H281DRAFT_05366 at 119.387 kb on - strand, within H281DRAFT_05366 at 119.557 kb on - strand at 119.664 kb on - strand at 119.688 kb on + strand at 119.691 kb on + strand at 119.722 kb on - strand at 119.902 kb on + strand, within H281DRAFT_05367 at 119.902 kb on + strand, within H281DRAFT_05367 at 119.903 kb on - strand, within H281DRAFT_05367 at 119.903 kb on - strand, within H281DRAFT_05367 at 119.903 kb on - strand, within H281DRAFT_05367 at 119.904 kb on + strand, within H281DRAFT_05367 at 119.904 kb on + strand, within H281DRAFT_05367 at 119.914 kb on - strand, within H281DRAFT_05367 at 119.914 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 117,637 + H281DRAFT_05364 0.47 -0.3 117,638 - H281DRAFT_05364 0.48 +0.0 117,747 + H281DRAFT_05364 0.55 +0.2 117,747 + H281DRAFT_05364 0.55 -0.3 117,754 + H281DRAFT_05364 0.55 -0.1 117,754 + H281DRAFT_05364 0.55 -0.2 117,754 + H281DRAFT_05364 0.55 +1.1 117,754 + H281DRAFT_05364 0.55 -0.9 117,937 - H281DRAFT_05364 0.68 -0.2 118,006 + H281DRAFT_05364 0.72 -0.1 118,051 + H281DRAFT_05364 0.75 -1.3 118,102 + H281DRAFT_05364 0.79 -0.3 118,102 + H281DRAFT_05364 0.79 -0.8 118,220 - H281DRAFT_05364 0.87 +0.2 118,418 - +0.4 118,691 + H281DRAFT_05365 0.39 +0.6 118,709 - H281DRAFT_05365 0.43 -0.6 118,709 - H281DRAFT_05365 0.43 -1.6 118,802 + H281DRAFT_05365 0.62 -0.0 118,803 - H281DRAFT_05365 0.62 +0.2 118,813 + H281DRAFT_05365 0.64 -1.1 118,813 + H281DRAFT_05365 0.64 +0.2 118,885 + H281DRAFT_05365 0.78 -0.5 118,885 + H281DRAFT_05365 0.78 -0.3 118,886 - H281DRAFT_05365 0.78 -0.6 118,886 - H281DRAFT_05365 0.78 -0.3 118,984 + -0.1 118,985 - +0.5 118,985 - -0.1 119,058 + +0.4 119,059 - -1.1 119,283 + H281DRAFT_05366 0.42 -0.1 119,283 + H281DRAFT_05366 0.42 -1.0 119,284 - H281DRAFT_05366 0.43 -0.1 119,284 - H281DRAFT_05366 0.43 -0.1 119,284 - H281DRAFT_05366 0.43 -0.3 119,284 - H281DRAFT_05366 0.43 -0.8 119,326 - H281DRAFT_05366 0.51 -0.9 119,386 + H281DRAFT_05366 0.64 +0.1 119,387 - H281DRAFT_05366 0.64 -0.2 119,557 - -0.6 119,664 - -1.0 119,688 + -0.8 119,691 + -0.8 119,722 - -1.3 119,902 + H281DRAFT_05367 0.13 -0.3 119,902 + H281DRAFT_05367 0.13 -0.2 119,903 - H281DRAFT_05367 0.13 -0.3 119,903 - H281DRAFT_05367 0.13 +0.5 119,903 - H281DRAFT_05367 0.13 -0.4 119,904 + H281DRAFT_05367 0.13 -0.8 119,904 + H281DRAFT_05367 0.13 -1.2 119,914 - H281DRAFT_05367 0.13 -0.3 119,914 - -0.9
Or see this region's nucleotide sequence