Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05358 and H281DRAFT_05359 are separated by 75 nucleotides H281DRAFT_05359 and H281DRAFT_05360 overlap by 4 nucleotides H281DRAFT_05360 and H281DRAFT_05361 are separated by 121 nucleotides
H281DRAFT_05358: H281DRAFT_05358 - glucose-6-phosphate 1-dehydrogenase, at 110,843 to 112,324
_05358
H281DRAFT_05359: H281DRAFT_05359 - type VI secretion system protein ImpK, at 112,400 to 113,179
_05359
H281DRAFT_05360: H281DRAFT_05360 - type VI secretion system protein ImpJ, at 113,176 to 114,522
_05360
H281DRAFT_05361: H281DRAFT_05361 - type VI secretion system protein VasD, at 114,644 to 115,309
_05361
Position (kb)
113
114
115 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 112.241 kb on + strand at 112.242 kb on - strand at 112.242 kb on - strand at 112.323 kb on - strand at 112.323 kb on - strand at 112.381 kb on + strand at 112.381 kb on + strand at 112.494 kb on + strand, within H281DRAFT_05359 at 112.495 kb on - strand, within H281DRAFT_05359 at 112.495 kb on - strand, within H281DRAFT_05359 at 112.495 kb on - strand, within H281DRAFT_05359 at 112.674 kb on + strand, within H281DRAFT_05359 at 112.674 kb on + strand, within H281DRAFT_05359 at 112.704 kb on + strand, within H281DRAFT_05359 at 112.704 kb on + strand, within H281DRAFT_05359 at 112.704 kb on + strand, within H281DRAFT_05359 at 112.704 kb on + strand, within H281DRAFT_05359 at 112.705 kb on - strand, within H281DRAFT_05359 at 112.705 kb on - strand, within H281DRAFT_05359 at 112.705 kb on - strand, within H281DRAFT_05359 at 112.705 kb on - strand, within H281DRAFT_05359 at 112.705 kb on - strand, within H281DRAFT_05359 at 112.705 kb on - strand, within H281DRAFT_05359 at 112.705 kb on - strand, within H281DRAFT_05359 at 112.705 kb on - strand, within H281DRAFT_05359 at 112.795 kb on - strand, within H281DRAFT_05359 at 112.935 kb on + strand, within H281DRAFT_05359 at 112.936 kb on - strand, within H281DRAFT_05359 at 112.936 kb on - strand, within H281DRAFT_05359 at 113.077 kb on - strand, within H281DRAFT_05359 at 113.077 kb on - strand, within H281DRAFT_05359 at 113.106 kb on + strand at 113.107 kb on - strand at 113.172 kb on + strand at 113.231 kb on + strand at 113.231 kb on + strand at 113.231 kb on + strand at 113.231 kb on + strand at 113.231 kb on + strand at 113.232 kb on - strand at 113.232 kb on - strand at 113.232 kb on - strand at 113.232 kb on - strand at 113.267 kb on + strand at 113.268 kb on - strand at 113.297 kb on + strand at 113.298 kb on - strand at 113.345 kb on + strand, within H281DRAFT_05360 at 113.472 kb on + strand, within H281DRAFT_05360 at 113.473 kb on - strand, within H281DRAFT_05360 at 113.474 kb on + strand, within H281DRAFT_05360 at 113.474 kb on + strand, within H281DRAFT_05360 at 113.475 kb on - strand, within H281DRAFT_05360 at 113.475 kb on - strand, within H281DRAFT_05360 at 113.475 kb on - strand, within H281DRAFT_05360 at 113.475 kb on - strand, within H281DRAFT_05360 at 113.562 kb on - strand, within H281DRAFT_05360 at 113.562 kb on - strand, within H281DRAFT_05360 at 113.604 kb on + strand, within H281DRAFT_05360 at 113.605 kb on - strand, within H281DRAFT_05360 at 113.646 kb on - strand, within H281DRAFT_05360 at 113.669 kb on + strand, within H281DRAFT_05360 at 113.669 kb on + strand, within H281DRAFT_05360 at 113.670 kb on - strand, within H281DRAFT_05360 at 113.670 kb on - strand, within H281DRAFT_05360 at 113.753 kb on + strand, within H281DRAFT_05360 at 113.754 kb on - strand, within H281DRAFT_05360 at 113.868 kb on - strand, within H281DRAFT_05360 at 113.870 kb on - strand, within H281DRAFT_05360 at 114.143 kb on + strand, within H281DRAFT_05360 at 114.143 kb on + strand, within H281DRAFT_05360 at 114.143 kb on + strand, within H281DRAFT_05360 at 114.179 kb on + strand, within H281DRAFT_05360 at 114.179 kb on + strand, within H281DRAFT_05360 at 114.179 kb on + strand, within H281DRAFT_05360 at 114.179 kb on + strand, within H281DRAFT_05360 at 114.237 kb on + strand, within H281DRAFT_05360 at 114.237 kb on + strand, within H281DRAFT_05360 at 114.238 kb on - strand, within H281DRAFT_05360 at 114.300 kb on - strand, within H281DRAFT_05360 at 114.388 kb on + strand at 114.388 kb on + strand at 114.389 kb on - strand at 114.399 kb on + strand at 114.399 kb on + strand at 114.399 kb on + strand at 114.400 kb on - strand at 114.401 kb on + strand at 114.402 kb on - strand at 114.411 kb on + strand at 114.534 kb on + strand at 114.534 kb on + strand at 114.534 kb on + strand at 114.534 kb on + strand at 114.535 kb on - strand at 114.535 kb on - strand at 114.535 kb on - strand at 114.535 kb on - strand at 114.565 kb on + strand at 114.565 kb on + strand at 114.566 kb on - strand at 114.566 kb on - strand at 114.566 kb on - strand at 114.566 kb on - strand at 114.571 kb on + strand at 114.591 kb on - strand at 114.645 kb on + strand at 114.646 kb on - strand at 114.646 kb on - strand at 114.655 kb on + strand at 114.655 kb on + strand at 114.655 kb on + strand at 114.656 kb on - strand at 114.656 kb on - strand at 114.742 kb on + strand, within H281DRAFT_05361 at 114.742 kb on + strand, within H281DRAFT_05361 at 114.742 kb on + strand, within H281DRAFT_05361 at 114.742 kb on + strand, within H281DRAFT_05361 at 114.742 kb on + strand, within H281DRAFT_05361 at 114.743 kb on - strand, within H281DRAFT_05361 at 114.743 kb on - strand, within H281DRAFT_05361 at 114.758 kb on + strand, within H281DRAFT_05361 at 114.864 kb on - strand, within H281DRAFT_05361 at 114.882 kb on + strand, within H281DRAFT_05361 at 114.882 kb on + strand at 114.882 kb on + strand, within H281DRAFT_05361 at 114.939 kb on - strand, within H281DRAFT_05361 at 114.939 kb on - strand, within H281DRAFT_05361 at 115.014 kb on + strand, within H281DRAFT_05361 at 115.014 kb on + strand, within H281DRAFT_05361 at 115.014 kb on + strand, within H281DRAFT_05361 at 115.014 kb on + strand, within H281DRAFT_05361 at 115.077 kb on + strand, within H281DRAFT_05361 at 115.079 kb on + strand, within H281DRAFT_05361 at 115.079 kb on + strand, within H281DRAFT_05361 at 115.080 kb on - strand, within H281DRAFT_05361 at 115.080 kb on - strand, within H281DRAFT_05361 at 115.080 kb on - strand, within H281DRAFT_05361 at 115.239 kb on - strand, within H281DRAFT_05361 at 115.272 kb on + strand at 115.272 kb on + strand at 115.273 kb on - strand at 115.273 kb on - strand at 115.273 kb on - strand at 115.273 kb on - strand at 115.273 kb on - strand at 115.303 kb on + strand at 115.304 kb on - strand at 115.304 kb on - strand at 115.304 kb on - strand at 115.322 kb on + strand at 115.346 kb on - strand at 115.346 kb on - strand at 115.366 kb on - strand at 115.392 kb on - strand at 115.403 kb on + strand at 115.403 kb on + strand at 115.403 kb on + strand at 115.404 kb on - strand at 115.404 kb on - strand at 115.404 kb on - strand at 115.509 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 112,241 + +0.6 112,242 - -0.8 112,242 - +0.1 112,323 - -1.2 112,323 - -0.1 112,381 + +0.6 112,381 + -0.5 112,494 + H281DRAFT_05359 0.12 -0.8 112,495 - H281DRAFT_05359 0.12 +0.6 112,495 - H281DRAFT_05359 0.12 -0.7 112,495 - H281DRAFT_05359 0.12 -0.2 112,674 + H281DRAFT_05359 0.35 +0.1 112,674 + H281DRAFT_05359 0.35 +0.2 112,704 + H281DRAFT_05359 0.39 +0.2 112,704 + H281DRAFT_05359 0.39 +0.1 112,704 + H281DRAFT_05359 0.39 -0.4 112,704 + H281DRAFT_05359 0.39 +0.1 112,705 - H281DRAFT_05359 0.39 -0.0 112,705 - H281DRAFT_05359 0.39 -0.3 112,705 - H281DRAFT_05359 0.39 -0.3 112,705 - H281DRAFT_05359 0.39 -0.6 112,705 - H281DRAFT_05359 0.39 -0.0 112,705 - H281DRAFT_05359 0.39 -0.2 112,705 - H281DRAFT_05359 0.39 -1.1 112,705 - H281DRAFT_05359 0.39 +0.4 112,795 - H281DRAFT_05359 0.51 -0.6 112,935 + H281DRAFT_05359 0.69 +0.2 112,936 - H281DRAFT_05359 0.69 -1.6 112,936 - H281DRAFT_05359 0.69 +0.4 113,077 - H281DRAFT_05359 0.87 +0.1 113,077 - H281DRAFT_05359 0.87 +0.5 113,106 + +0.1 113,107 - -0.1 113,172 + -0.3 113,231 + -0.5 113,231 + -0.1 113,231 + -0.2 113,231 + -0.1 113,231 + -3.4 113,232 - -1.0 113,232 - +0.0 113,232 - -0.6 113,232 - -0.3 113,267 + -0.6 113,268 - -0.4 113,297 + +0.2 113,298 - -0.6 113,345 + H281DRAFT_05360 0.13 -0.1 113,472 + H281DRAFT_05360 0.22 -0.0 113,473 - H281DRAFT_05360 0.22 -0.9 113,474 + H281DRAFT_05360 0.22 -0.5 113,474 + H281DRAFT_05360 0.22 -0.2 113,475 - H281DRAFT_05360 0.22 +0.3 113,475 - H281DRAFT_05360 0.22 -0.8 113,475 - H281DRAFT_05360 0.22 +1.5 113,475 - H281DRAFT_05360 0.22 -1.2 113,562 - H281DRAFT_05360 0.29 +0.1 113,562 - H281DRAFT_05360 0.29 +1.2 113,604 + H281DRAFT_05360 0.32 -0.4 113,605 - H281DRAFT_05360 0.32 -0.1 113,646 - H281DRAFT_05360 0.35 -0.5 113,669 + H281DRAFT_05360 0.37 -0.2 113,669 + H281DRAFT_05360 0.37 -0.7 113,670 - H281DRAFT_05360 0.37 +0.1 113,670 - H281DRAFT_05360 0.37 -0.4 113,753 + H281DRAFT_05360 0.43 +0.8 113,754 - H281DRAFT_05360 0.43 -0.6 113,868 - H281DRAFT_05360 0.51 -0.3 113,870 - H281DRAFT_05360 0.52 -0.8 114,143 + H281DRAFT_05360 0.72 +0.4 114,143 + H281DRAFT_05360 0.72 -0.0 114,143 + H281DRAFT_05360 0.72 +0.1 114,179 + H281DRAFT_05360 0.74 -0.2 114,179 + H281DRAFT_05360 0.74 +1.7 114,179 + H281DRAFT_05360 0.74 -0.0 114,179 + H281DRAFT_05360 0.74 -0.2 114,237 + H281DRAFT_05360 0.79 +0.2 114,237 + H281DRAFT_05360 0.79 -0.1 114,238 - H281DRAFT_05360 0.79 -0.6 114,300 - H281DRAFT_05360 0.83 +0.3 114,388 + -0.5 114,388 + -0.1 114,389 - -0.3 114,399 + +0.8 114,399 + -0.6 114,399 + -0.3 114,400 - +0.1 114,401 + +0.1 114,402 - +0.6 114,411 + -0.9 114,534 + -0.1 114,534 + -0.1 114,534 + -0.2 114,534 + +0.1 114,535 - -0.2 114,535 - -0.4 114,535 - +0.0 114,535 - -0.2 114,565 + -0.3 114,565 + +0.0 114,566 - -0.2 114,566 - +0.0 114,566 - +0.1 114,566 - -0.1 114,571 + -1.3 114,591 - -0.5 114,645 + +0.3 114,646 - +0.8 114,646 - -0.5 114,655 + +0.1 114,655 + +0.2 114,655 + +0.3 114,656 - -0.7 114,656 - -0.2 114,742 + H281DRAFT_05361 0.15 -0.6 114,742 + H281DRAFT_05361 0.15 -0.1 114,742 + H281DRAFT_05361 0.15 +0.5 114,742 + H281DRAFT_05361 0.15 +0.3 114,742 + H281DRAFT_05361 0.15 +0.6 114,743 - H281DRAFT_05361 0.15 -0.2 114,743 - H281DRAFT_05361 0.15 +0.4 114,758 + H281DRAFT_05361 0.17 -0.2 114,864 - H281DRAFT_05361 0.33 +0.2 114,882 + H281DRAFT_05361 0.36 +0.1 114,882 + +1.5 114,882 + H281DRAFT_05361 0.36 +0.4 114,939 - H281DRAFT_05361 0.44 -1.4 114,939 - H281DRAFT_05361 0.44 +1.0 115,014 + H281DRAFT_05361 0.56 +0.6 115,014 + H281DRAFT_05361 0.56 +1.5 115,014 + H281DRAFT_05361 0.56 +0.0 115,014 + H281DRAFT_05361 0.56 +0.3 115,077 + H281DRAFT_05361 0.65 -0.0 115,079 + H281DRAFT_05361 0.65 +0.3 115,079 + H281DRAFT_05361 0.65 -0.0 115,080 - H281DRAFT_05361 0.65 +0.4 115,080 - H281DRAFT_05361 0.65 -0.4 115,080 - H281DRAFT_05361 0.65 -0.3 115,239 - H281DRAFT_05361 0.89 -0.4 115,272 + +1.0 115,272 + -0.0 115,273 - -0.1 115,273 - -0.5 115,273 - +0.6 115,273 - -0.2 115,273 - -1.9 115,303 + +0.5 115,304 - -0.2 115,304 - +0.1 115,304 - +0.1 115,322 + +0.9 115,346 - -0.4 115,346 - -0.1 115,366 - +0.4 115,392 - -0.1 115,403 + -0.7 115,403 + +0.6 115,403 + +0.3 115,404 - -0.4 115,404 - -0.2 115,404 - -0.6 115,509 - +0.1
Or see this region's nucleotide sequence