Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_04806

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_04805 and H281DRAFT_04806 are separated by 287 nucleotidesH281DRAFT_04806 and H281DRAFT_04807 are separated by 403 nucleotidesH281DRAFT_04807 and H281DRAFT_04808 are separated by 52 nucleotides H281DRAFT_04805: H281DRAFT_04805 - methyltransferase, FkbM family, at 239,230 to 240,135 _04805 H281DRAFT_04806: H281DRAFT_04806 - methyl-accepting chemotaxis sensory transducer with Cache sensor, at 240,423 to 241,955 _04806 H281DRAFT_04807: H281DRAFT_04807 - chaperonin GroES, at 242,359 to 242,649 _04807 H281DRAFT_04808: H281DRAFT_04808 - chaperonin GroEL, at 242,702 to 244,342 _04808 Position (kb) 240 241 242Strain fitness (log2 ratio) -1 0 1at 239.526 kb on - strand, within H281DRAFT_04805at 239.900 kb on + strand, within H281DRAFT_04805at 240.086 kb on + strandat 240.112 kb on - strandat 240.294 kb on + strandat 240.356 kb on + strandat 240.357 kb on - strandat 240.357 kb on - strandat 240.357 kb on - strandat 240.358 kb on + strandat 240.731 kb on + strand, within H281DRAFT_04806at 240.731 kb on + strand, within H281DRAFT_04806at 240.732 kb on - strand, within H281DRAFT_04806at 241.449 kb on + strand, within H281DRAFT_04806at 241.450 kb on - strand, within H281DRAFT_04806at 241.559 kb on + strand, within H281DRAFT_04806at 241.559 kb on + strand, within H281DRAFT_04806at 241.559 kb on + strand, within H281DRAFT_04806at 241.560 kb on - strand, within H281DRAFT_04806at 241.696 kb on + strand, within H281DRAFT_04806at 241.792 kb on + strand, within H281DRAFT_04806at 241.792 kb on + strand, within H281DRAFT_04806at 241.793 kb on - strand, within H281DRAFT_04806at 241.795 kb on + strand, within H281DRAFT_04806at 241.796 kb on - strand, within H281DRAFT_04806at 241.796 kb on - strand, within H281DRAFT_04806at 241.876 kb on + strandat 241.886 kb on - strandat 241.995 kb on + strandat 241.997 kb on + strandat 241.997 kb on + strandat 241.997 kb on + strandat 242.044 kb on + strandat 242.044 kb on + strandat 242.044 kb on + strandat 242.045 kb on - strandat 242.045 kb on - strandat 242.048 kb on - strandat 242.176 kb on + strandat 242.176 kb on + strandat 242.177 kb on - strandat 242.181 kb on - strandat 242.204 kb on + strandat 242.204 kb on + strandat 242.205 kb on - strandat 242.205 kb on - strandat 242.205 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C)
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239,526 - H281DRAFT_04805 0.33 +0.3
239,900 + H281DRAFT_04805 0.74 +1.0
240,086 + +1.1
240,112 - -0.2
240,294 + +0.2
240,356 + -0.7
240,357 - +0.5
240,357 - -0.0
240,357 - +0.3
240,358 + -0.1
240,731 + H281DRAFT_04806 0.20 +0.9
240,731 + H281DRAFT_04806 0.20 -0.2
240,732 - H281DRAFT_04806 0.20 +1.0
241,449 + H281DRAFT_04806 0.67 -0.7
241,450 - H281DRAFT_04806 0.67 -0.1
241,559 + H281DRAFT_04806 0.74 -0.3
241,559 + H281DRAFT_04806 0.74 +0.3
241,559 + H281DRAFT_04806 0.74 -0.6
241,560 - H281DRAFT_04806 0.74 +0.7
241,696 + H281DRAFT_04806 0.83 -0.6
241,792 + H281DRAFT_04806 0.89 +0.2
241,792 + H281DRAFT_04806 0.89 -0.4
241,793 - H281DRAFT_04806 0.89 -0.0
241,795 + H281DRAFT_04806 0.89 -0.3
241,796 - H281DRAFT_04806 0.90 +0.7
241,796 - H281DRAFT_04806 0.90 +0.7
241,876 + -0.8
241,886 - +0.1
241,995 + +1.4
241,997 + +0.2
241,997 + +0.0
241,997 + +0.5
242,044 + -0.7
242,044 + +1.4
242,044 + +0.3
242,045 - +0.2
242,045 - +0.2
242,048 - +0.4
242,176 + -0.1
242,176 + -0.4
242,177 - -0.2
242,181 - +0.6
242,204 + +0.1
242,204 + -0.1
242,205 - -1.5
242,205 - +0.0
242,205 - +0.8

Or see this region's nucleotide sequence