Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_04793

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_04792 and H281DRAFT_04793 are separated by 58 nucleotidesH281DRAFT_04793 and H281DRAFT_04794 are separated by 75 nucleotides H281DRAFT_04792: H281DRAFT_04792 - Glycosyltransferase involved in cell wall bisynthesis, at 219,969 to 221,075 _04792 H281DRAFT_04793: H281DRAFT_04793 - Glycosyltransferase, at 221,134 to 222,075 _04793 H281DRAFT_04794: H281DRAFT_04794 - Glycosyltransferase involved in cell wall bisynthesis, at 222,151 to 223,083 _04794 Position (kb) 221 222 223Strain fitness (log2 ratio) -1 0 1 2 3at 220.184 kb on - strand, within H281DRAFT_04792at 220.742 kb on - strand, within H281DRAFT_04792at 220.980 kb on + strandat 221.153 kb on + strandat 221.302 kb on + strand, within H281DRAFT_04793at 222.040 kb on - strandat 222.289 kb on + strand, within H281DRAFT_04794at 222.290 kb on - strand, within H281DRAFT_04794at 222.380 kb on - strand, within H281DRAFT_04794at 222.382 kb on - strand, within H281DRAFT_04794at 222.465 kb on - strand, within H281DRAFT_04794at 222.663 kb on - strand, within H281DRAFT_04794at 222.814 kb on - strand, within H281DRAFT_04794

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C)
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220,184 - H281DRAFT_04792 0.19 +3.6
220,742 - H281DRAFT_04792 0.70 +0.2
220,980 + +0.3
221,153 + -0.2
221,302 + H281DRAFT_04793 0.18 +1.0
222,040 - -1.3
222,289 + H281DRAFT_04794 0.15 +0.3
222,290 - H281DRAFT_04794 0.15 -1.0
222,380 - H281DRAFT_04794 0.25 -0.6
222,382 - H281DRAFT_04794 0.25 +0.2
222,465 - H281DRAFT_04794 0.34 -1.2
222,663 - H281DRAFT_04794 0.55 -1.2
222,814 - H281DRAFT_04794 0.71 -0.2

Or see this region's nucleotide sequence