Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04737 and H281DRAFT_04738 are separated by 94 nucleotides H281DRAFT_04738 and H281DRAFT_04739 are separated by 102 nucleotides
H281DRAFT_04737: H281DRAFT_04737 - glutaryl-CoA dehydrogenase, at 144,707 to 145,897
_04737
H281DRAFT_04738: H281DRAFT_04738 - transcriptional regulator, IclR family, at 145,992 to 146,777
_04738
H281DRAFT_04739: H281DRAFT_04739 - EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant), at 146,880 to 147,713
_04739
Position (kb) 145
146
147 Strain fitness (log2 ratio) -2
-1
0
1
2 at 145.057 kb on + strand, within H281DRAFT_04737 at 145.072 kb on - strand, within H281DRAFT_04737 at 145.132 kb on - strand, within H281DRAFT_04737 at 145.261 kb on + strand, within H281DRAFT_04737 at 145.261 kb on + strand, within H281DRAFT_04737 at 145.471 kb on + strand, within H281DRAFT_04737 at 145.472 kb on - strand, within H281DRAFT_04737 at 145.527 kb on + strand at 145.527 kb on + strand, within H281DRAFT_04737 at 145.650 kb on + strand, within H281DRAFT_04737 at 145.651 kb on - strand, within H281DRAFT_04737 at 145.651 kb on - strand, within H281DRAFT_04737 at 145.659 kb on + strand, within H281DRAFT_04737 at 145.659 kb on + strand, within H281DRAFT_04737 at 145.680 kb on + strand, within H281DRAFT_04737 at 145.680 kb on + strand, within H281DRAFT_04737 at 145.681 kb on - strand, within H281DRAFT_04737 at 145.769 kb on + strand, within H281DRAFT_04737 at 145.769 kb on + strand, within H281DRAFT_04737 at 145.770 kb on - strand, within H281DRAFT_04737 at 145.800 kb on + strand at 145.902 kb on + strand at 145.902 kb on + strand at 145.902 kb on + strand at 145.903 kb on - strand at 145.984 kb on - strand at 146.164 kb on - strand, within H281DRAFT_04738 at 146.165 kb on + strand, within H281DRAFT_04738 at 146.184 kb on + strand, within H281DRAFT_04738 at 146.317 kb on + strand, within H281DRAFT_04738 at 146.318 kb on - strand, within H281DRAFT_04738 at 146.364 kb on + strand, within H281DRAFT_04738 at 146.365 kb on - strand, within H281DRAFT_04738 at 146.457 kb on + strand, within H281DRAFT_04738 at 146.457 kb on + strand, within H281DRAFT_04738 at 146.458 kb on - strand, within H281DRAFT_04738 at 146.593 kb on - strand, within H281DRAFT_04738 at 146.876 kb on + strand at 146.876 kb on + strand at 146.876 kb on + strand at 146.877 kb on - strand at 146.900 kb on - strand at 146.942 kb on - strand at 146.942 kb on - strand at 147.152 kb on - strand, within H281DRAFT_04739 at 147.161 kb on - strand, within H281DRAFT_04739 at 147.191 kb on + strand, within H281DRAFT_04739 at 147.226 kb on - strand, within H281DRAFT_04739 at 147.287 kb on - strand, within H281DRAFT_04739 at 147.315 kb on + strand, within H281DRAFT_04739 at 147.322 kb on - strand, within H281DRAFT_04739 at 147.327 kb on + strand, within H281DRAFT_04739 at 147.441 kb on - strand, within H281DRAFT_04739 at 147.715 kb on + strand at 147.728 kb on - strand at 147.733 kb on - strand at 147.733 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 145,057 + H281DRAFT_04737 0.29 -0.4 145,072 - H281DRAFT_04737 0.31 -0.1 145,132 - H281DRAFT_04737 0.36 -0.3 145,261 + H281DRAFT_04737 0.47 -0.7 145,261 + H281DRAFT_04737 0.47 -2.0 145,471 + H281DRAFT_04737 0.64 -1.8 145,472 - H281DRAFT_04737 0.64 +0.2 145,527 + +1.8 145,527 + H281DRAFT_04737 0.69 -0.1 145,650 + H281DRAFT_04737 0.79 +1.2 145,651 - H281DRAFT_04737 0.79 -0.1 145,651 - H281DRAFT_04737 0.79 -0.3 145,659 + H281DRAFT_04737 0.80 +1.2 145,659 + H281DRAFT_04737 0.80 -0.1 145,680 + H281DRAFT_04737 0.82 -1.7 145,680 + H281DRAFT_04737 0.82 -0.3 145,681 - H281DRAFT_04737 0.82 -0.8 145,769 + H281DRAFT_04737 0.89 -0.5 145,769 + H281DRAFT_04737 0.89 -0.9 145,770 - H281DRAFT_04737 0.89 -1.6 145,800 + -0.6 145,902 + -0.3 145,902 + +0.0 145,902 + -0.2 145,903 - +1.4 145,984 - +0.5 146,164 - H281DRAFT_04738 0.22 +0.0 146,165 + H281DRAFT_04738 0.22 +0.1 146,184 + H281DRAFT_04738 0.24 +0.5 146,317 + H281DRAFT_04738 0.41 -1.0 146,318 - H281DRAFT_04738 0.41 +0.3 146,364 + H281DRAFT_04738 0.47 +0.8 146,365 - H281DRAFT_04738 0.47 +0.5 146,457 + H281DRAFT_04738 0.59 +0.4 146,457 + H281DRAFT_04738 0.59 +0.3 146,458 - H281DRAFT_04738 0.59 -0.3 146,593 - H281DRAFT_04738 0.76 +0.3 146,876 + -0.9 146,876 + -0.0 146,876 + +1.7 146,877 - +0.8 146,900 - -0.9 146,942 - -0.6 146,942 - -0.4 147,152 - H281DRAFT_04739 0.33 +1.8 147,161 - H281DRAFT_04739 0.34 -0.3 147,191 + H281DRAFT_04739 0.37 -0.7 147,226 - H281DRAFT_04739 0.41 -1.3 147,287 - H281DRAFT_04739 0.49 +0.1 147,315 + H281DRAFT_04739 0.52 -0.2 147,322 - H281DRAFT_04739 0.53 -1.1 147,327 + H281DRAFT_04739 0.54 -1.7 147,441 - H281DRAFT_04739 0.67 +0.6 147,715 + -0.0 147,728 - +0.6 147,733 - -0.7 147,733 - +1.0
Or see this region's nucleotide sequence