Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04651 and H281DRAFT_04652 are separated by 70 nucleotides H281DRAFT_04652 and H281DRAFT_04653 are separated by 292 nucleotides H281DRAFT_04653 and H281DRAFT_04654 are separated by 26 nucleotides H281DRAFT_04654 and H281DRAFT_04655 overlap by 1 nucleotides
H281DRAFT_04651: H281DRAFT_04651 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase, at 52,852 to 53,997
_04651
H281DRAFT_04652: H281DRAFT_04652 - ADP-ribose pyrophosphatase YjhB, NUDIX family, at 54,068 to 54,547
_04652
H281DRAFT_04653: H281DRAFT_04653 - NAD(P) transhydrogenase subunit alpha, at 54,840 to 55,982
_04653
H281DRAFT_04654: H281DRAFT_04654 - NAD(P) transhydrogenase subunit alpha, at 56,009 to 56,338
_04654
H281DRAFT_04655: H281DRAFT_04655 - NAD(P) transhydrogenase subunit beta, at 56,338 to 57,792
_04655
Position (kb) 54
55
56 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 53.998 kb on - strand at 54.060 kb on - strand at 54.095 kb on - strand at 54.095 kb on - strand at 54.095 kb on - strand at 54.095 kb on - strand at 54.095 kb on - strand at 54.274 kb on - strand, within H281DRAFT_04652 at 54.289 kb on - strand, within H281DRAFT_04652 at 54.331 kb on - strand, within H281DRAFT_04652 at 54.331 kb on - strand, within H281DRAFT_04652 at 54.331 kb on - strand, within H281DRAFT_04652 at 54.568 kb on - strand at 54.821 kb on - strand at 54.821 kb on - strand at 54.916 kb on - strand at 54.916 kb on - strand at 55.145 kb on - strand, within H281DRAFT_04653 at 55.252 kb on - strand, within H281DRAFT_04653 at 55.281 kb on + strand, within H281DRAFT_04653 at 55.483 kb on - strand, within H281DRAFT_04653 at 55.725 kb on + strand, within H281DRAFT_04653 at 55.726 kb on - strand, within H281DRAFT_04653 at 55.726 kb on - strand, within H281DRAFT_04653 at 55.851 kb on + strand, within H281DRAFT_04653 at 55.980 kb on + strand at 55.981 kb on - strand at 56.063 kb on + strand, within H281DRAFT_04654 at 56.064 kb on - strand, within H281DRAFT_04654 at 56.336 kb on + strand at 56.365 kb on + strand at 56.365 kb on + strand at 56.365 kb on + strand at 56.365 kb on + strand at 56.365 kb on + strand at 56.366 kb on - strand at 56.439 kb on + strand at 56.440 kb on - strand at 56.440 kb on - strand at 56.775 kb on + strand, within H281DRAFT_04655 at 56.776 kb on - strand, within H281DRAFT_04655 at 56.839 kb on + strand, within H281DRAFT_04655 at 56.875 kb on + strand, within H281DRAFT_04655 at 56.875 kb on + strand, within H281DRAFT_04655
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 53,998 - +0.1 54,060 - -1.1 54,095 - -0.3 54,095 - -0.8 54,095 - +0.8 54,095 - +0.5 54,095 - -0.2 54,274 - H281DRAFT_04652 0.43 +0.1 54,289 - H281DRAFT_04652 0.46 -0.1 54,331 - H281DRAFT_04652 0.55 +0.0 54,331 - H281DRAFT_04652 0.55 -2.4 54,331 - H281DRAFT_04652 0.55 +0.2 54,568 - -0.2 54,821 - -0.4 54,821 - +0.1 54,916 - +0.5 54,916 - -0.4 55,145 - H281DRAFT_04653 0.27 +0.0 55,252 - H281DRAFT_04653 0.36 +0.4 55,281 + H281DRAFT_04653 0.39 -0.6 55,483 - H281DRAFT_04653 0.56 -3.2 55,725 + H281DRAFT_04653 0.77 +0.8 55,726 - H281DRAFT_04653 0.78 -0.1 55,726 - H281DRAFT_04653 0.78 -0.5 55,851 + H281DRAFT_04653 0.88 -0.6 55,980 + -1.7 55,981 - +0.1 56,063 + H281DRAFT_04654 0.16 +1.7 56,064 - H281DRAFT_04654 0.17 +0.5 56,336 + +0.6 56,365 + +0.1 56,365 + +1.1 56,365 + -0.0 56,365 + -0.9 56,365 + +0.8 56,366 - +0.2 56,439 + -0.9 56,440 - -0.3 56,440 - +0.4 56,775 + H281DRAFT_04655 0.30 -0.8 56,776 - H281DRAFT_04655 0.30 -0.4 56,839 + H281DRAFT_04655 0.34 -0.2 56,875 + H281DRAFT_04655 0.37 -0.1 56,875 + H281DRAFT_04655 0.37 +0.2
Or see this region's nucleotide sequence