Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04642 and H281DRAFT_04643 are separated by 123 nucleotides H281DRAFT_04643 and H281DRAFT_04644 are separated by 40 nucleotides H281DRAFT_04644 and H281DRAFT_04645 are separated by 76 nucleotides
H281DRAFT_04642: H281DRAFT_04642 - Outer membrane protein (porin), at 43,389 to 44,501
_04642
H281DRAFT_04643: H281DRAFT_04643 - methylmalonyl-CoA epimerase, at 44,625 to 45,011
_04643
H281DRAFT_04644: H281DRAFT_04644 - hypothetical protein, at 45,052 to 45,450
_04644
H281DRAFT_04645: H281DRAFT_04645 - hypothetical protein, at 45,527 to 46,414
_04645
Position (kb) 44
45
46 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 43.645 kb on - strand, within H281DRAFT_04642 at 43.645 kb on - strand, within H281DRAFT_04642 at 43.645 kb on - strand, within H281DRAFT_04642 at 43.645 kb on - strand, within H281DRAFT_04642 at 43.747 kb on - strand, within H281DRAFT_04642 at 43.747 kb on - strand, within H281DRAFT_04642 at 43.775 kb on - strand, within H281DRAFT_04642 at 43.872 kb on + strand, within H281DRAFT_04642 at 43.885 kb on - strand, within H281DRAFT_04642 at 43.942 kb on - strand, within H281DRAFT_04642 at 43.971 kb on + strand, within H281DRAFT_04642 at 43.972 kb on - strand, within H281DRAFT_04642 at 44.011 kb on - strand, within H281DRAFT_04642 at 44.073 kb on + strand, within H281DRAFT_04642 at 44.074 kb on - strand, within H281DRAFT_04642 at 44.107 kb on - strand, within H281DRAFT_04642 at 44.326 kb on - strand, within H281DRAFT_04642 at 44.343 kb on + strand, within H281DRAFT_04642 at 44.344 kb on - strand, within H281DRAFT_04642 at 44.361 kb on - strand, within H281DRAFT_04642 at 44.370 kb on + strand, within H281DRAFT_04642 at 44.370 kb on + strand, within H281DRAFT_04642 at 44.371 kb on - strand, within H281DRAFT_04642 at 44.512 kb on - strand at 44.586 kb on - strand at 44.591 kb on + strand at 44.591 kb on + strand at 44.619 kb on + strand at 44.682 kb on + strand, within H281DRAFT_04643 at 44.682 kb on + strand, within H281DRAFT_04643 at 44.707 kb on + strand, within H281DRAFT_04643 at 44.725 kb on - strand, within H281DRAFT_04643 at 44.821 kb on - strand, within H281DRAFT_04643 at 44.821 kb on - strand, within H281DRAFT_04643 at 44.871 kb on + strand, within H281DRAFT_04643 at 44.872 kb on - strand, within H281DRAFT_04643 at 44.872 kb on - strand, within H281DRAFT_04643 at 45.070 kb on + strand at 45.070 kb on + strand at 45.448 kb on + strand at 45.672 kb on + strand, within H281DRAFT_04645 at 45.673 kb on - strand, within H281DRAFT_04645 at 45.673 kb on - strand, within H281DRAFT_04645 at 45.783 kb on + strand, within H281DRAFT_04645 at 45.784 kb on - strand, within H281DRAFT_04645 at 45.991 kb on - strand, within H281DRAFT_04645
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 43,645 - H281DRAFT_04642 0.23 -0.4 43,645 - H281DRAFT_04642 0.23 -0.1 43,645 - H281DRAFT_04642 0.23 +0.6 43,645 - H281DRAFT_04642 0.23 +1.4 43,747 - H281DRAFT_04642 0.32 -0.1 43,747 - H281DRAFT_04642 0.32 -0.4 43,775 - H281DRAFT_04642 0.35 +0.2 43,872 + H281DRAFT_04642 0.43 +0.7 43,885 - H281DRAFT_04642 0.45 +0.8 43,942 - H281DRAFT_04642 0.50 +0.3 43,971 + H281DRAFT_04642 0.52 +1.2 43,972 - H281DRAFT_04642 0.52 +0.6 44,011 - H281DRAFT_04642 0.56 +1.9 44,073 + H281DRAFT_04642 0.61 +0.2 44,074 - H281DRAFT_04642 0.62 -0.3 44,107 - H281DRAFT_04642 0.65 +0.2 44,326 - H281DRAFT_04642 0.84 +3.4 44,343 + H281DRAFT_04642 0.86 +0.5 44,344 - H281DRAFT_04642 0.86 +0.2 44,361 - H281DRAFT_04642 0.87 +0.2 44,370 + H281DRAFT_04642 0.88 +0.7 44,370 + H281DRAFT_04642 0.88 +0.9 44,371 - H281DRAFT_04642 0.88 -0.3 44,512 - +0.3 44,586 - -0.7 44,591 + +0.0 44,591 + +0.5 44,619 + -1.6 44,682 + H281DRAFT_04643 0.15 -1.4 44,682 + H281DRAFT_04643 0.15 -0.8 44,707 + H281DRAFT_04643 0.21 -1.9 44,725 - H281DRAFT_04643 0.26 -2.0 44,821 - H281DRAFT_04643 0.51 -0.8 44,821 - H281DRAFT_04643 0.51 -1.5 44,871 + H281DRAFT_04643 0.64 +0.8 44,872 - H281DRAFT_04643 0.64 -3.3 44,872 - H281DRAFT_04643 0.64 -0.7 45,070 + +0.2 45,070 + -2.0 45,448 + +0.6 45,672 + H281DRAFT_04645 0.16 +1.2 45,673 - H281DRAFT_04645 0.16 +0.2 45,673 - H281DRAFT_04645 0.16 -1.4 45,783 + H281DRAFT_04645 0.29 -0.1 45,784 - H281DRAFT_04645 0.29 -0.0 45,991 - H281DRAFT_04645 0.52 -1.2
Or see this region's nucleotide sequence