Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04388 and H281DRAFT_04389 are separated by 82 nucleotides H281DRAFT_04389 and H281DRAFT_04390 are separated by 98 nucleotides
H281DRAFT_04388: H281DRAFT_04388 - trehalose 6-phosphatase (EC 3.1.3.12), at 101,215 to 101,964
_04388
H281DRAFT_04389: H281DRAFT_04389 - trehalose 6-phosphate synthase, at 102,047 to 103,507
_04389
H281DRAFT_04390: H281DRAFT_04390 - ATP-binding cassette, subfamily B, at 103,606 to 105,528
_04390
Position (kb) 102
103
104 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 101.681 kb on - strand, within H281DRAFT_04388 at 101.681 kb on - strand, within H281DRAFT_04388 at 101.992 kb on + strand at 101.992 kb on + strand at 101.992 kb on + strand at 101.993 kb on - strand at 101.993 kb on - strand at 101.993 kb on - strand at 102.008 kb on + strand at 102.009 kb on - strand at 102.009 kb on - strand at 102.027 kb on + strand at 102.027 kb on + strand at 102.027 kb on + strand at 102.027 kb on + strand at 102.027 kb on + strand at 102.028 kb on - strand at 102.028 kb on - strand at 102.062 kb on - strand at 102.279 kb on - strand, within H281DRAFT_04389 at 102.341 kb on + strand, within H281DRAFT_04389 at 102.366 kb on - strand, within H281DRAFT_04389 at 102.412 kb on - strand, within H281DRAFT_04389 at 102.426 kb on + strand, within H281DRAFT_04389 at 102.426 kb on + strand, within H281DRAFT_04389 at 102.427 kb on - strand, within H281DRAFT_04389 at 102.427 kb on - strand, within H281DRAFT_04389 at 102.570 kb on + strand, within H281DRAFT_04389 at 102.571 kb on - strand, within H281DRAFT_04389 at 102.746 kb on + strand, within H281DRAFT_04389 at 102.814 kb on + strand, within H281DRAFT_04389 at 102.814 kb on + strand, within H281DRAFT_04389 at 102.860 kb on + strand, within H281DRAFT_04389 at 102.861 kb on - strand, within H281DRAFT_04389 at 102.983 kb on + strand, within H281DRAFT_04389 at 102.984 kb on - strand, within H281DRAFT_04389 at 102.984 kb on - strand, within H281DRAFT_04389 at 103.067 kb on + strand, within H281DRAFT_04389 at 103.067 kb on + strand, within H281DRAFT_04389 at 103.075 kb on + strand, within H281DRAFT_04389 at 103.075 kb on + strand, within H281DRAFT_04389 at 103.075 kb on + strand, within H281DRAFT_04389 at 103.076 kb on - strand, within H281DRAFT_04389 at 103.083 kb on - strand, within H281DRAFT_04389 at 103.175 kb on + strand, within H281DRAFT_04389 at 103.175 kb on + strand, within H281DRAFT_04389 at 103.175 kb on + strand, within H281DRAFT_04389 at 103.176 kb on - strand, within H281DRAFT_04389 at 103.176 kb on - strand, within H281DRAFT_04389 at 103.555 kb on + strand at 103.577 kb on + strand at 103.612 kb on - strand at 103.612 kb on - strand at 103.992 kb on + strand, within H281DRAFT_04390 at 104.225 kb on + strand, within H281DRAFT_04390
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 101,681 - H281DRAFT_04388 0.62 -3.3 101,681 - H281DRAFT_04388 0.62 -2.1 101,992 + -0.6 101,992 + +0.7 101,992 + -0.6 101,993 - -0.3 101,993 - -0.1 101,993 - -0.9 102,008 + -0.4 102,009 - -0.7 102,009 - -0.1 102,027 + -0.0 102,027 + -0.8 102,027 + +0.5 102,027 + -0.7 102,027 + +1.4 102,028 - -0.8 102,028 - -0.5 102,062 - +0.7 102,279 - H281DRAFT_04389 0.16 +0.0 102,341 + H281DRAFT_04389 0.20 +0.5 102,366 - H281DRAFT_04389 0.22 +1.0 102,412 - H281DRAFT_04389 0.25 +0.4 102,426 + H281DRAFT_04389 0.26 +0.1 102,426 + H281DRAFT_04389 0.26 +0.8 102,427 - H281DRAFT_04389 0.26 +1.1 102,427 - H281DRAFT_04389 0.26 -0.5 102,570 + H281DRAFT_04389 0.36 +0.5 102,571 - H281DRAFT_04389 0.36 +0.6 102,746 + H281DRAFT_04389 0.48 +0.5 102,814 + H281DRAFT_04389 0.52 -0.7 102,814 + H281DRAFT_04389 0.52 +0.1 102,860 + H281DRAFT_04389 0.56 +0.9 102,861 - H281DRAFT_04389 0.56 -0.0 102,983 + H281DRAFT_04389 0.64 -1.1 102,984 - H281DRAFT_04389 0.64 -0.5 102,984 - H281DRAFT_04389 0.64 -0.9 103,067 + H281DRAFT_04389 0.70 -0.5 103,067 + H281DRAFT_04389 0.70 +0.9 103,075 + H281DRAFT_04389 0.70 -0.2 103,075 + H281DRAFT_04389 0.70 +0.7 103,075 + H281DRAFT_04389 0.70 +0.1 103,076 - H281DRAFT_04389 0.70 -0.1 103,083 - H281DRAFT_04389 0.71 -1.9 103,175 + H281DRAFT_04389 0.77 +0.2 103,175 + H281DRAFT_04389 0.77 +0.8 103,175 + H281DRAFT_04389 0.77 +0.1 103,176 - H281DRAFT_04389 0.77 -0.1 103,176 - H281DRAFT_04389 0.77 +0.1 103,555 + -0.6 103,577 + -0.1 103,612 - -0.6 103,612 - -0.3 103,992 + H281DRAFT_04390 0.20 +1.6 104,225 + H281DRAFT_04390 0.32 +1.0
Or see this region's nucleotide sequence