Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04195 and H281DRAFT_04196 are separated by 180 nucleotides H281DRAFT_04196 and H281DRAFT_04197 overlap by 23 nucleotides H281DRAFT_04197 and H281DRAFT_04198 overlap by 8 nucleotides H281DRAFT_04198 and H281DRAFT_04199 are separated by 113 nucleotides
H281DRAFT_04195: H281DRAFT_04195 - heptosyltransferase-2, at 314,298 to 315,323
_04195
H281DRAFT_04196: H281DRAFT_04196 - SnoaL-like domain-containing protein, at 315,504 to 315,950
_04196
H281DRAFT_04197: H281DRAFT_04197 - hypothetical protein, at 315,928 to 317,103
_04197
H281DRAFT_04198: H281DRAFT_04198 - Protein of unknown function (DUF2946), at 317,096 to 317,668
_04198
H281DRAFT_04199: H281DRAFT_04199 - Putative Zn-dependent protease, contains TPR repeats, at 317,782 to 319,650
_04199
Position (kb) 315
316
317
318 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 315.339 kb on + strand at 315.339 kb on + strand at 315.339 kb on + strand at 315.522 kb on - strand at 315.558 kb on + strand, within H281DRAFT_04196 at 315.559 kb on - strand, within H281DRAFT_04196 at 315.581 kb on + strand, within H281DRAFT_04196 at 315.582 kb on - strand, within H281DRAFT_04196 at 315.828 kb on + strand, within H281DRAFT_04196 at 315.828 kb on + strand, within H281DRAFT_04196 at 315.828 kb on + strand, within H281DRAFT_04196 at 315.829 kb on - strand, within H281DRAFT_04196 at 315.829 kb on - strand, within H281DRAFT_04196 at 315.829 kb on - strand, within H281DRAFT_04196 at 316.140 kb on + strand, within H281DRAFT_04197 at 316.200 kb on + strand, within H281DRAFT_04197 at 316.354 kb on + strand, within H281DRAFT_04197 at 316.354 kb on + strand, within H281DRAFT_04197 at 316.403 kb on + strand, within H281DRAFT_04197 at 316.687 kb on + strand, within H281DRAFT_04197 at 316.688 kb on - strand, within H281DRAFT_04197 at 316.688 kb on - strand, within H281DRAFT_04197 at 316.690 kb on - strand, within H281DRAFT_04197 at 316.690 kb on - strand, within H281DRAFT_04197 at 316.792 kb on + strand, within H281DRAFT_04197 at 316.792 kb on + strand, within H281DRAFT_04197 at 316.793 kb on - strand, within H281DRAFT_04197 at 316.849 kb on + strand, within H281DRAFT_04197 at 316.850 kb on - strand, within H281DRAFT_04197 at 316.850 kb on - strand, within H281DRAFT_04197 at 317.188 kb on + strand, within H281DRAFT_04198 at 317.273 kb on + strand, within H281DRAFT_04198 at 317.325 kb on + strand, within H281DRAFT_04198 at 317.325 kb on + strand, within H281DRAFT_04198 at 317.325 kb on + strand, within H281DRAFT_04198 at 317.325 kb on + strand, within H281DRAFT_04198 at 317.325 kb on + strand, within H281DRAFT_04198 at 317.325 kb on + strand, within H281DRAFT_04198 at 317.327 kb on + strand, within H281DRAFT_04198 at 317.327 kb on + strand, within H281DRAFT_04198 at 317.327 kb on + strand, within H281DRAFT_04198 at 317.327 kb on + strand, within H281DRAFT_04198 at 317.328 kb on - strand, within H281DRAFT_04198 at 317.328 kb on - strand, within H281DRAFT_04198 at 317.328 kb on - strand, within H281DRAFT_04198 at 317.328 kb on - strand, within H281DRAFT_04198 at 317.328 kb on - strand, within H281DRAFT_04198 at 317.328 kb on - strand, within H281DRAFT_04198 at 317.328 kb on - strand, within H281DRAFT_04198 at 317.328 kb on - strand at 317.342 kb on + strand, within H281DRAFT_04198 at 317.367 kb on + strand, within H281DRAFT_04198 at 317.783 kb on + strand at 317.861 kb on + strand at 317.861 kb on + strand at 317.862 kb on - strand at 317.862 kb on - strand at 317.864 kb on + strand at 317.865 kb on - strand at 318.002 kb on + strand, within H281DRAFT_04199 at 318.002 kb on + strand, within H281DRAFT_04199 at 318.069 kb on + strand, within H281DRAFT_04199 at 318.097 kb on + strand, within H281DRAFT_04199 at 318.098 kb on - strand, within H281DRAFT_04199
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 315,339 + +1.7 315,339 + +2.4 315,339 + +1.2 315,522 - -2.5 315,558 + H281DRAFT_04196 0.12 -0.7 315,559 - H281DRAFT_04196 0.12 +0.1 315,581 + H281DRAFT_04196 0.17 -0.3 315,582 - H281DRAFT_04196 0.17 -1.3 315,828 + H281DRAFT_04196 0.72 -1.0 315,828 + H281DRAFT_04196 0.72 -0.7 315,828 + H281DRAFT_04196 0.72 -0.5 315,829 - H281DRAFT_04196 0.73 -1.7 315,829 - H281DRAFT_04196 0.73 -0.9 315,829 - H281DRAFT_04196 0.73 -0.6 316,140 + H281DRAFT_04197 0.18 +0.8 316,200 + H281DRAFT_04197 0.23 -0.9 316,354 + H281DRAFT_04197 0.36 -1.2 316,354 + H281DRAFT_04197 0.36 +0.4 316,403 + H281DRAFT_04197 0.40 -1.4 316,687 + H281DRAFT_04197 0.65 +0.1 316,688 - H281DRAFT_04197 0.65 -0.3 316,688 - H281DRAFT_04197 0.65 -0.9 316,690 - H281DRAFT_04197 0.65 +0.3 316,690 - H281DRAFT_04197 0.65 +0.3 316,792 + H281DRAFT_04197 0.73 -0.7 316,792 + H281DRAFT_04197 0.73 +0.2 316,793 - H281DRAFT_04197 0.74 +0.3 316,849 + H281DRAFT_04197 0.78 +0.2 316,850 - H281DRAFT_04197 0.78 +0.6 316,850 - H281DRAFT_04197 0.78 +0.1 317,188 + H281DRAFT_04198 0.16 +0.3 317,273 + H281DRAFT_04198 0.31 -0.1 317,325 + H281DRAFT_04198 0.40 +0.7 317,325 + H281DRAFT_04198 0.40 +0.8 317,325 + H281DRAFT_04198 0.40 +0.1 317,325 + H281DRAFT_04198 0.40 -0.6 317,325 + H281DRAFT_04198 0.40 -0.0 317,325 + H281DRAFT_04198 0.40 -0.5 317,327 + H281DRAFT_04198 0.40 +0.2 317,327 + H281DRAFT_04198 0.40 -0.1 317,327 + H281DRAFT_04198 0.40 -0.2 317,327 + H281DRAFT_04198 0.40 +0.0 317,328 - H281DRAFT_04198 0.40 +1.8 317,328 - H281DRAFT_04198 0.40 -0.9 317,328 - H281DRAFT_04198 0.40 +0.6 317,328 - H281DRAFT_04198 0.40 +0.0 317,328 - H281DRAFT_04198 0.40 +0.1 317,328 - H281DRAFT_04198 0.40 +0.9 317,328 - H281DRAFT_04198 0.40 -0.6 317,328 - +3.1 317,342 + H281DRAFT_04198 0.43 +0.2 317,367 + H281DRAFT_04198 0.47 +0.2 317,783 + +0.8 317,861 + -0.2 317,861 + +1.1 317,862 - -0.9 317,862 - -0.1 317,864 + +0.0 317,865 - +0.2 318,002 + H281DRAFT_04199 0.12 +0.0 318,002 + H281DRAFT_04199 0.12 +0.2 318,069 + H281DRAFT_04199 0.15 +0.1 318,097 + H281DRAFT_04199 0.17 +0.8 318,098 - H281DRAFT_04199 0.17 +0.2
Or see this region's nucleotide sequence