Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_04188

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_04187 and H281DRAFT_04188 are separated by 142 nucleotidesH281DRAFT_04188 and H281DRAFT_04189 are separated by 391 nucleotides H281DRAFT_04187: H281DRAFT_04187 - phosphoribosylaminoimidazole-succinocarboxamide synthase, at 305,519 to 306,409 _04187 H281DRAFT_04188: H281DRAFT_04188 - fructose-bisphosphate aldolase, at 306,552 to 307,616 _04188 H281DRAFT_04189: H281DRAFT_04189 - pyruvate kinase, at 308,008 to 309,444 _04189 Position (kb) 306 307 308Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 305.911 kb on - strand, within H281DRAFT_04187at 306.340 kb on - strandat 306.340 kb on - strandat 306.526 kb on - strandat 306.546 kb on + strandat 306.546 kb on + strandat 306.586 kb on + strandat 306.586 kb on + strandat 306.587 kb on - strandat 306.587 kb on - strandat 307.629 kb on + strandat 307.630 kb on - strandat 307.695 kb on - strandat 307.930 kb on - strandat 307.937 kb on + strandat 308.012 kb on + strandat 308.583 kb on - strand, within H281DRAFT_04189at 308.583 kb on - strand, within H281DRAFT_04189at 308.583 kb on - strand, within H281DRAFT_04189at 308.583 kb on - strand, within H281DRAFT_04189at 308.583 kb on - strand, within H281DRAFT_04189

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C)
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305,911 - H281DRAFT_04187 0.44 +4.0
306,340 - +3.9
306,340 - +4.1
306,526 - -1.6
306,546 + +3.0
306,546 + +1.8
306,586 + -0.0
306,586 + +0.5
306,587 - +0.2
306,587 - +0.3
307,629 + -0.0
307,630 - -2.5
307,695 - -0.5
307,930 - -2.4
307,937 + +1.3
308,012 + +0.0
308,583 - H281DRAFT_04189 0.40 -0.7
308,583 - H281DRAFT_04189 0.40 -0.6
308,583 - H281DRAFT_04189 0.40 -0.5
308,583 - H281DRAFT_04189 0.40 -2.0
308,583 - H281DRAFT_04189 0.40 -0.5

Or see this region's nucleotide sequence