Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04178 and H281DRAFT_04179 are separated by 141 nucleotides H281DRAFT_04179 and H281DRAFT_04180 are separated by 4 nucleotides H281DRAFT_04180 and H281DRAFT_04181 are separated by 302 nucleotides
H281DRAFT_04178: H281DRAFT_04178 - serine protease Do, at 294,298 to 295,818
_04178
H281DRAFT_04179: H281DRAFT_04179 - two-component system, OmpR family, sensor kinase, at 295,960 to 297,261
_04179
H281DRAFT_04180: H281DRAFT_04180 - two component transcriptional regulator, winged helix family, at 297,266 to 297,928
_04180
H281DRAFT_04181: H281DRAFT_04181 - D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4), at 298,231 to 299,928
_04181
Position (kb) 295
296
297
298 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 294.998 kb on + strand, within H281DRAFT_04178 at 295.100 kb on + strand, within H281DRAFT_04178 at 295.156 kb on - strand, within H281DRAFT_04178 at 295.381 kb on - strand, within H281DRAFT_04178 at 295.382 kb on + strand, within H281DRAFT_04178 at 295.383 kb on - strand, within H281DRAFT_04178 at 295.383 kb on - strand, within H281DRAFT_04178 at 295.383 kb on - strand, within H281DRAFT_04178 at 295.401 kb on + strand, within H281DRAFT_04178 at 295.401 kb on + strand, within H281DRAFT_04178 at 295.401 kb on + strand, within H281DRAFT_04178 at 295.493 kb on + strand, within H281DRAFT_04178 at 295.493 kb on + strand, within H281DRAFT_04178 at 295.494 kb on - strand, within H281DRAFT_04178 at 295.494 kb on - strand, within H281DRAFT_04178 at 295.502 kb on + strand, within H281DRAFT_04178 at 295.503 kb on - strand, within H281DRAFT_04178 at 295.823 kb on + strand at 295.888 kb on + strand at 295.888 kb on + strand at 295.888 kb on + strand at 295.889 kb on - strand at 295.974 kb on + strand at 295.975 kb on - strand at 296.017 kb on - strand at 296.083 kb on - strand at 296.240 kb on + strand, within H281DRAFT_04179 at 296.240 kb on + strand, within H281DRAFT_04179 at 296.241 kb on - strand, within H281DRAFT_04179 at 296.241 kb on - strand, within H281DRAFT_04179 at 296.367 kb on - strand, within H281DRAFT_04179 at 296.955 kb on + strand, within H281DRAFT_04179 at 297.015 kb on - strand, within H281DRAFT_04179 at 297.015 kb on - strand, within H281DRAFT_04179 at 297.018 kb on - strand, within H281DRAFT_04179 at 297.018 kb on - strand, within H281DRAFT_04179 at 297.018 kb on - strand, within H281DRAFT_04179 at 297.179 kb on + strand at 297.289 kb on - strand at 297.364 kb on + strand, within H281DRAFT_04180 at 297.364 kb on + strand, within H281DRAFT_04180 at 297.364 kb on + strand, within H281DRAFT_04180 at 297.364 kb on + strand, within H281DRAFT_04180 at 297.364 kb on + strand, within H281DRAFT_04180 at 297.365 kb on - strand, within H281DRAFT_04180 at 297.365 kb on - strand, within H281DRAFT_04180 at 297.365 kb on - strand, within H281DRAFT_04180 at 297.365 kb on - strand, within H281DRAFT_04180 at 297.393 kb on + strand, within H281DRAFT_04180 at 297.393 kb on + strand, within H281DRAFT_04180 at 297.394 kb on - strand, within H281DRAFT_04180 at 297.596 kb on - strand, within H281DRAFT_04180 at 297.636 kb on + strand, within H281DRAFT_04180 at 297.636 kb on + strand, within H281DRAFT_04180 at 297.743 kb on + strand, within H281DRAFT_04180 at 297.744 kb on - strand, within H281DRAFT_04180 at 297.966 kb on - strand at 298.030 kb on + strand at 298.030 kb on + strand at 298.031 kb on - strand at 298.031 kb on - strand at 298.077 kb on + strand at 298.077 kb on + strand at 298.077 kb on + strand at 298.080 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 294,998 + H281DRAFT_04178 0.46 +2.8 295,100 + H281DRAFT_04178 0.53 -0.6 295,156 - H281DRAFT_04178 0.56 +0.2 295,381 - H281DRAFT_04178 0.71 -1.3 295,382 + H281DRAFT_04178 0.71 -0.3 295,383 - H281DRAFT_04178 0.71 -1.6 295,383 - H281DRAFT_04178 0.71 -1.8 295,383 - H281DRAFT_04178 0.71 +0.7 295,401 + H281DRAFT_04178 0.73 -2.4 295,401 + H281DRAFT_04178 0.73 -0.6 295,401 + H281DRAFT_04178 0.73 -0.4 295,493 + H281DRAFT_04178 0.79 -0.4 295,493 + H281DRAFT_04178 0.79 -0.8 295,494 - H281DRAFT_04178 0.79 +0.4 295,494 - H281DRAFT_04178 0.79 -1.7 295,502 + H281DRAFT_04178 0.79 -0.6 295,503 - H281DRAFT_04178 0.79 -0.4 295,823 + -0.4 295,888 + +0.3 295,888 + +0.4 295,888 + -0.1 295,889 - +0.4 295,974 + -1.2 295,975 - -2.4 296,017 - -1.2 296,083 - -1.6 296,240 + H281DRAFT_04179 0.22 -2.3 296,240 + H281DRAFT_04179 0.22 -2.3 296,241 - H281DRAFT_04179 0.22 -2.4 296,241 - H281DRAFT_04179 0.22 -2.9 296,367 - H281DRAFT_04179 0.31 -2.3 296,955 + H281DRAFT_04179 0.76 -2.1 297,015 - H281DRAFT_04179 0.81 -0.2 297,015 - H281DRAFT_04179 0.81 -3.1 297,018 - H281DRAFT_04179 0.81 -1.6 297,018 - H281DRAFT_04179 0.81 -2.6 297,018 - H281DRAFT_04179 0.81 -0.5 297,179 + -3.8 297,289 - +0.8 297,364 + H281DRAFT_04180 0.15 -0.2 297,364 + H281DRAFT_04180 0.15 +0.1 297,364 + H281DRAFT_04180 0.15 -1.3 297,364 + H281DRAFT_04180 0.15 -0.0 297,364 + H281DRAFT_04180 0.15 -0.2 297,365 - H281DRAFT_04180 0.15 -0.8 297,365 - H281DRAFT_04180 0.15 -1.2 297,365 - H281DRAFT_04180 0.15 +0.9 297,365 - H281DRAFT_04180 0.15 +1.0 297,393 + H281DRAFT_04180 0.19 +1.3 297,393 + H281DRAFT_04180 0.19 +1.4 297,394 - H281DRAFT_04180 0.19 +0.1 297,596 - H281DRAFT_04180 0.50 +1.5 297,636 + H281DRAFT_04180 0.56 -0.8 297,636 + H281DRAFT_04180 0.56 -0.5 297,743 + H281DRAFT_04180 0.72 +0.1 297,744 - H281DRAFT_04180 0.72 +1.3 297,966 - -0.1 298,030 + -0.8 298,030 + -0.8 298,031 - +1.0 298,031 - -0.3 298,077 + -0.2 298,077 + +0.8 298,077 + -0.8 298,080 + -0.1
Or see this region's nucleotide sequence