Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03966 and H281DRAFT_03967 are separated by 60 nucleotides H281DRAFT_03967 and H281DRAFT_03968 are separated by 16 nucleotides H281DRAFT_03968 and H281DRAFT_03969 are separated by 58 nucleotides H281DRAFT_03969 and H281DRAFT_03970 are separated by 34 nucleotides
H281DRAFT_03966: H281DRAFT_03966 - Dehydrogenase (flavoprotein), at 72,555 to 73,868
_03966
H281DRAFT_03967: H281DRAFT_03967 - Methylase involved in ubiquinone/menaquinone biosynthesis, at 73,929 to 74,657
_03967
H281DRAFT_03968: H281DRAFT_03968 - hypothetical protein, at 74,674 to 75,117
_03968
H281DRAFT_03969: H281DRAFT_03969 - hypothetical protein, at 75,176 to 75,598
_03969
H281DRAFT_03970: H281DRAFT_03970 - 3-oxoacyl-[acyl-carrier-protein] synthase-1, at 75,633 to 76,871
_03970
Position (kb) 74
75
76 Strain fitness (log2 ratio) -2
-1
0
1 at 73.859 kb on + strand at 73.860 kb on - strand at 73.882 kb on + strand at 73.896 kb on - strand at 73.904 kb on + strand at 73.904 kb on + strand at 73.904 kb on + strand at 73.904 kb on + strand at 73.904 kb on + strand at 73.905 kb on - strand at 73.905 kb on - strand at 73.905 kb on - strand at 73.905 kb on - strand at 73.905 kb on - strand at 73.905 kb on - strand at 73.909 kb on - strand at 73.909 kb on - strand at 74.170 kb on - strand, within H281DRAFT_03967 at 74.409 kb on + strand, within H281DRAFT_03967 at 74.409 kb on + strand, within H281DRAFT_03967 at 74.410 kb on - strand, within H281DRAFT_03967 at 74.410 kb on - strand, within H281DRAFT_03967 at 74.478 kb on + strand, within H281DRAFT_03967 at 74.539 kb on - strand, within H281DRAFT_03967 at 74.778 kb on - strand, within H281DRAFT_03968 at 74.899 kb on - strand, within H281DRAFT_03968 at 74.966 kb on + strand, within H281DRAFT_03968 at 74.967 kb on - strand, within H281DRAFT_03968 at 75.026 kb on + strand, within H281DRAFT_03968 at 75.031 kb on - strand, within H281DRAFT_03968 at 75.121 kb on + strand at 75.121 kb on + strand at 75.122 kb on - strand at 75.138 kb on + strand at 75.471 kb on + strand, within H281DRAFT_03969 at 75.618 kb on - strand at 75.794 kb on + strand, within H281DRAFT_03970 at 75.822 kb on - strand, within H281DRAFT_03970 at 75.822 kb on - strand, within H281DRAFT_03970 at 75.823 kb on + strand, within H281DRAFT_03970 at 75.823 kb on + strand, within H281DRAFT_03970 at 75.989 kb on - strand, within H281DRAFT_03970 at 75.989 kb on - strand, within H281DRAFT_03970 at 75.989 kb on - strand, within H281DRAFT_03970 at 76.106 kb on - strand, within H281DRAFT_03970
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 73,859 + -1.1 73,860 - -0.4 73,882 + -0.4 73,896 - -0.0 73,904 + +1.1 73,904 + -1.2 73,904 + +1.2 73,904 + +0.0 73,904 + +0.2 73,905 - -2.7 73,905 - -0.2 73,905 - +1.7 73,905 - -0.4 73,905 - +0.0 73,905 - -0.6 73,909 - -1.3 73,909 - +0.1 74,170 - H281DRAFT_03967 0.33 -1.2 74,409 + H281DRAFT_03967 0.66 -0.1 74,409 + H281DRAFT_03967 0.66 -0.4 74,410 - H281DRAFT_03967 0.66 -0.2 74,410 - H281DRAFT_03967 0.66 -0.8 74,478 + H281DRAFT_03967 0.75 +0.6 74,539 - H281DRAFT_03967 0.84 +0.4 74,778 - H281DRAFT_03968 0.23 -0.1 74,899 - H281DRAFT_03968 0.51 +0.3 74,966 + H281DRAFT_03968 0.66 -0.1 74,967 - H281DRAFT_03968 0.66 -0.7 75,026 + H281DRAFT_03968 0.79 +0.2 75,031 - H281DRAFT_03968 0.80 +0.4 75,121 + -0.4 75,121 + -0.0 75,122 - +0.8 75,138 + -0.8 75,471 + H281DRAFT_03969 0.70 -0.8 75,618 - +0.3 75,794 + H281DRAFT_03970 0.13 +1.2 75,822 - H281DRAFT_03970 0.15 -1.0 75,822 - H281DRAFT_03970 0.15 -0.4 75,823 + H281DRAFT_03970 0.15 -0.0 75,823 + H281DRAFT_03970 0.15 -0.6 75,989 - H281DRAFT_03970 0.29 +0.2 75,989 - H281DRAFT_03970 0.29 -0.6 75,989 - H281DRAFT_03970 0.29 -0.7 76,106 - H281DRAFT_03970 0.38 -0.5
Or see this region's nucleotide sequence