Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_03836

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_03834 and H281DRAFT_03835 are separated by 33 nucleotidesH281DRAFT_03835 and H281DRAFT_03836 overlap by 4 nucleotidesH281DRAFT_03836 and H281DRAFT_03837 are separated by 12 nucleotidesH281DRAFT_03837 and H281DRAFT_03838 are separated by 14 nucleotides H281DRAFT_03834: H281DRAFT_03834 - NitT/TauT family transport system substrate-binding protein, at 361,080 to 362,150 _03834 H281DRAFT_03835: H281DRAFT_03835 - NitT/TauT family transport system permease protein, at 362,184 to 362,999 _03835 H281DRAFT_03836: H281DRAFT_03836 - NitT/TauT family transport system ATP-binding protein, at 362,996 to 363,787 _03836 H281DRAFT_03837: H281DRAFT_03837 - hypothetical protein, at 363,800 to 364,504 _03837 H281DRAFT_03838: H281DRAFT_03838 - hypothetical protein, at 364,519 to 365,160 _03838 Position (kb) 362 363 364Strain fitness (log2 ratio) -1 0 1 2at 362.157 kb on + strandat 362.230 kb on + strandat 362.231 kb on - strandat 362.266 kb on - strand, within H281DRAFT_03835at 362.878 kb on + strand, within H281DRAFT_03835at 362.879 kb on - strand, within H281DRAFT_03835at 362.902 kb on - strand, within H281DRAFT_03835at 363.574 kb on + strand, within H281DRAFT_03836at 363.683 kb on - strand, within H281DRAFT_03836at 364.011 kb on - strand, within H281DRAFT_03837at 364.304 kb on + strand, within H281DRAFT_03837at 364.304 kb on + strand, within H281DRAFT_03837at 364.317 kb on - strand, within H281DRAFT_03837at 364.525 kb on - strandat 364.676 kb on - strandat 364.765 kb on + strand, within H281DRAFT_03838

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C)
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362,157 + -0.8
362,230 + +0.1
362,231 - +0.8
362,266 - H281DRAFT_03835 0.10 -1.3
362,878 + H281DRAFT_03835 0.85 +2.0
362,879 - H281DRAFT_03835 0.85 -0.8
362,902 - H281DRAFT_03835 0.88 -1.0
363,574 + H281DRAFT_03836 0.73 -0.6
363,683 - H281DRAFT_03836 0.87 -0.7
364,011 - H281DRAFT_03837 0.30 +1.2
364,304 + H281DRAFT_03837 0.71 +1.2
364,304 + H281DRAFT_03837 0.71 +0.6
364,317 - H281DRAFT_03837 0.73 +0.6
364,525 - +0.3
364,676 - +1.8
364,765 + H281DRAFT_03838 0.38 -0.4

Or see this region's nucleotide sequence