Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03214 and H281DRAFT_03215 are separated by 463 nucleotides H281DRAFT_03215 and H281DRAFT_03216 overlap by 4 nucleotides H281DRAFT_03216 and H281DRAFT_03217 are separated by 58 nucleotides
H281DRAFT_03214: H281DRAFT_03214 - 4-hydroxyphenylpyruvate dioxygenase, at 260,641 to 262,524
_03214
H281DRAFT_03215: H281DRAFT_03215 - 3-dehydroquinate dehydratase, at 262,988 to 263,443
_03215
H281DRAFT_03216: H281DRAFT_03216 - shikimate dehydrogenase (EC 1.1.1.25), at 263,440 to 264,342
_03216
H281DRAFT_03217: H281DRAFT_03217 - MFS transporter, ACS family, D-galactonate transporter, at 264,401 to 265,768
_03217
Position (kb) 262
263
264 Strain fitness (log2 ratio) -1
0
1
2 at 262.061 kb on - strand, within H281DRAFT_03214 at 262.231 kb on + strand, within H281DRAFT_03214 at 262.318 kb on + strand, within H281DRAFT_03214 at 262.413 kb on - strand at 262.480 kb on + strand at 262.699 kb on + strand at 262.896 kb on + strand at 262.946 kb on - strand at 263.004 kb on + strand at 263.226 kb on - strand, within H281DRAFT_03215 at 263.294 kb on - strand, within H281DRAFT_03215 at 263.336 kb on + strand, within H281DRAFT_03215 at 263.337 kb on - strand, within H281DRAFT_03215 at 263.388 kb on - strand, within H281DRAFT_03215 at 263.677 kb on + strand, within H281DRAFT_03216 at 263.678 kb on - strand, within H281DRAFT_03216 at 263.694 kb on - strand, within H281DRAFT_03216 at 263.694 kb on - strand, within H281DRAFT_03216 at 263.699 kb on - strand, within H281DRAFT_03216 at 264.170 kb on - strand, within H281DRAFT_03216 at 264.310 kb on + strand at 264.311 kb on - strand at 264.393 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 262,061 - H281DRAFT_03214 0.75 +0.7 262,231 + H281DRAFT_03214 0.84 +0.6 262,318 + H281DRAFT_03214 0.89 +0.6 262,413 - +0.2 262,480 + -0.1 262,699 + +0.2 262,896 + -1.4 262,946 - +0.4 263,004 + -0.1 263,226 - H281DRAFT_03215 0.52 -0.0 263,294 - H281DRAFT_03215 0.67 +0.2 263,336 + H281DRAFT_03215 0.76 -0.6 263,337 - H281DRAFT_03215 0.77 -0.3 263,388 - H281DRAFT_03215 0.88 -0.8 263,677 + H281DRAFT_03216 0.26 +0.6 263,678 - H281DRAFT_03216 0.26 -1.1 263,694 - H281DRAFT_03216 0.28 -1.3 263,694 - H281DRAFT_03216 0.28 +1.6 263,699 - H281DRAFT_03216 0.29 +1.0 264,170 - H281DRAFT_03216 0.81 +0.1 264,310 + +2.1 264,311 - -0.0 264,393 - +0.5
Or see this region's nucleotide sequence