Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02929 and H281DRAFT_02930 are separated by 281 nucleotides H281DRAFT_02930 and H281DRAFT_02931 are separated by 44 nucleotides H281DRAFT_02931 and H281DRAFT_02932 are separated by 481 nucleotides
H281DRAFT_02929: H281DRAFT_02929 - Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase, at 540,330 to 541,841
_02929
H281DRAFT_02930: H281DRAFT_02930 - Superinfection immunity protein, at 542,123 to 542,434
_02930
H281DRAFT_02931: H281DRAFT_02931 - Uncharacterized conserved protein YodC, DUF2158 family, at 542,479 to 542,748
_02931
H281DRAFT_02932: H281DRAFT_02932 - Major Facilitator Superfamily protein, at 543,230 to 543,679
_02932
Position (kb)
542
543 Strain fitness (log2 ratio)
-2
-1
0
1 at 541.627 kb on + strand, within H281DRAFT_02929 at 541.684 kb on + strand, within H281DRAFT_02929 at 541.778 kb on + strand at 541.844 kb on + strand at 541.905 kb on + strand at 541.906 kb on - strand at 541.906 kb on - strand at 542.019 kb on - strand at 542.122 kb on + strand at 542.122 kb on + strand at 542.123 kb on - strand at 542.123 kb on - strand at 542.123 kb on - strand at 542.123 kb on - strand at 542.123 kb on - strand at 542.645 kb on + strand, within H281DRAFT_02931 at 542.646 kb on - strand, within H281DRAFT_02931 at 542.649 kb on + strand, within H281DRAFT_02931 at 542.649 kb on + strand, within H281DRAFT_02931 at 542.650 kb on - strand, within H281DRAFT_02931 at 542.650 kb on - strand, within H281DRAFT_02931 at 542.722 kb on - strand at 542.722 kb on - strand at 542.748 kb on + strand at 542.748 kb on + strand at 542.749 kb on - strand at 542.749 kb on - strand at 542.771 kb on - strand at 542.812 kb on - strand at 543.000 kb on + strand at 543.000 kb on + strand at 543.001 kb on - strand at 543.082 kb on - strand at 543.082 kb on - strand at 543.177 kb on + strand at 543.201 kb on + strand at 543.416 kb on - strand, within H281DRAFT_02932 at 543.461 kb on + strand, within H281DRAFT_02932 at 543.461 kb on + strand, within H281DRAFT_02932 at 543.558 kb on - strand, within H281DRAFT_02932 at 543.571 kb on - strand, within H281DRAFT_02932 at 543.571 kb on - strand, within H281DRAFT_02932 at 543.630 kb on + strand, within H281DRAFT_02932 at 543.631 kb on - strand, within H281DRAFT_02932 at 543.631 kb on - strand, within H281DRAFT_02932 at 543.631 kb on - strand, within H281DRAFT_02932 at 543.633 kb on + strand, within H281DRAFT_02932 at 543.633 kb on + strand, within H281DRAFT_02932 at 543.634 kb on - strand, within H281DRAFT_02932 at 543.634 kb on - strand, within H281DRAFT_02932
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 541,627 + H281DRAFT_02929 0.86 -0.3 541,684 + H281DRAFT_02929 0.90 +0.0 541,778 + -0.2 541,844 + +1.0 541,905 + -0.5 541,906 - -0.2 541,906 - -0.4 542,019 - -0.4 542,122 + -1.8 542,122 + +0.7 542,123 - -0.1 542,123 - +0.5 542,123 - +0.4 542,123 - -0.0 542,123 - +0.9 542,645 + H281DRAFT_02931 0.61 -0.3 542,646 - H281DRAFT_02931 0.62 -0.6 542,649 + H281DRAFT_02931 0.63 -0.1 542,649 + H281DRAFT_02931 0.63 +1.0 542,650 - H281DRAFT_02931 0.63 -0.8 542,650 - H281DRAFT_02931 0.63 -1.3 542,722 - -0.2 542,722 - +0.4 542,748 + -0.5 542,748 + -0.9 542,749 - -1.1 542,749 - -0.5 542,771 - +0.8 542,812 - +0.3 543,000 + +0.4 543,000 + -1.0 543,001 - +1.2 543,082 - +0.3 543,082 - +0.5 543,177 + -0.3 543,201 + -0.4 543,416 - H281DRAFT_02932 0.41 +0.5 543,461 + H281DRAFT_02932 0.51 +0.3 543,461 + H281DRAFT_02932 0.51 -0.3 543,558 - H281DRAFT_02932 0.73 +0.5 543,571 - H281DRAFT_02932 0.76 -0.2 543,571 - H281DRAFT_02932 0.76 -0.3 543,630 + H281DRAFT_02932 0.89 -1.2 543,631 - H281DRAFT_02932 0.89 -0.1 543,631 - H281DRAFT_02932 0.89 -0.4 543,631 - H281DRAFT_02932 0.89 -0.4 543,633 + H281DRAFT_02932 0.90 +1.7 543,633 + H281DRAFT_02932 0.90 -0.2 543,634 - H281DRAFT_02932 0.90 +0.4 543,634 - H281DRAFT_02932 0.90 -0.1
Or see this region's nucleotide sequence