Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02781 and H281DRAFT_02782 are separated by 34 nucleotides H281DRAFT_02782 and H281DRAFT_02783 overlap by 1 nucleotides H281DRAFT_02783 and H281DRAFT_02784 are separated by 166 nucleotides H281DRAFT_02784 and H281DRAFT_02785 are separated by 52 nucleotides H281DRAFT_02785 and H281DRAFT_02786 are separated by 262 nucleotides
H281DRAFT_02781: H281DRAFT_02781 - Response regulator c-di-GMP phosphodiesterase, RpfG family, contains REC and HD-GYP domains, at 371,702 to 373,093
_02781
H281DRAFT_02782: H281DRAFT_02782 - hypothetical protein, at 373,128 to 373,613
_02782
H281DRAFT_02783: H281DRAFT_02783 - hypothetical protein, at 373,613 to 373,921
_02783
H281DRAFT_02784: H281DRAFT_02784 - Uncharacterized conserved protein YecE, DUF72 family, at 374,088 to 375,008
_02784
H281DRAFT_02785: H281DRAFT_02785 - DNA polymerase, at 375,061 to 375,723
_02785
H281DRAFT_02786: H281DRAFT_02786 - hypothetical protein, at 375,986 to 376,156
_02786
Position (kb) 374
375
376 Strain fitness (log2 ratio) -2
-1
0
1 at 373.988 kb on + strand at 373.989 kb on - strand at 373.989 kb on - strand at 373.994 kb on + strand at 373.995 kb on - strand at 373.995 kb on - strand at 374.137 kb on - strand at 374.138 kb on + strand at 374.161 kb on - strand at 374.161 kb on - strand at 374.731 kb on - strand, within H281DRAFT_02784 at 374.899 kb on - strand, within H281DRAFT_02784 at 374.904 kb on + strand, within H281DRAFT_02784 at 375.173 kb on + strand, within H281DRAFT_02785 at 375.174 kb on - strand, within H281DRAFT_02785 at 375.744 kb on + strand at 375.744 kb on + strand at 375.745 kb on - strand at 375.931 kb on - strand at 375.997 kb on + strand at 375.998 kb on - strand at 376.001 kb on + strand at 376.001 kb on + strand at 376.002 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 373,988 + +0.4 373,989 - +0.8 373,989 - +0.0 373,994 + +0.8 373,995 - -0.2 373,995 - -1.9 374,137 - -0.8 374,138 + +0.1 374,161 - +0.4 374,161 - +0.6 374,731 - H281DRAFT_02784 0.70 -1.0 374,899 - H281DRAFT_02784 0.88 -1.6 374,904 + H281DRAFT_02784 0.89 -0.1 375,173 + H281DRAFT_02785 0.17 -1.3 375,174 - H281DRAFT_02785 0.17 -0.5 375,744 + +0.3 375,744 + +0.2 375,745 - -0.6 375,931 - -0.2 375,997 + +0.4 375,998 - -0.8 376,001 + -0.4 376,001 + +0.3 376,002 - +0.5
Or see this region's nucleotide sequence