Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_02683

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_02682 and H281DRAFT_02683 are separated by 72 nucleotidesH281DRAFT_02683 and H281DRAFT_02684 are separated by 134 nucleotides H281DRAFT_02682: H281DRAFT_02682 - MFS transporter, AAHS family, 4-hydroxybenzoate transporter, at 264,435 to 265,793 _02682 H281DRAFT_02683: H281DRAFT_02683 - xanthine dehydrogenase accessory factor, at 265,866 to 266,903 _02683 H281DRAFT_02684: H281DRAFT_02684 - methyl-accepting chemotaxis sensory transducer with TarH sensor, at 267,038 to 268,582 _02684 Position (kb) 265 266 267Strain fitness (log2 ratio) -2 -1 0 1 2 3at 264.906 kb on - strand, within H281DRAFT_02682at 264.978 kb on + strand, within H281DRAFT_02682at 264.979 kb on - strand, within H281DRAFT_02682at 265.382 kb on + strand, within H281DRAFT_02682at 265.552 kb on - strand, within H281DRAFT_02682at 265.865 kb on + strandat 266.392 kb on - strand, within H281DRAFT_02683at 266.619 kb on + strand, within H281DRAFT_02683at 266.914 kb on - strandat 267.167 kb on + strandat 267.168 kb on - strandat 267.255 kb on + strand, within H281DRAFT_02684at 267.256 kb on - strand, within H281DRAFT_02684at 267.817 kb on + strand, within H281DRAFT_02684

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C)
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264,906 - H281DRAFT_02682 0.35 +0.2
264,978 + H281DRAFT_02682 0.40 +0.5
264,979 - H281DRAFT_02682 0.40 -1.0
265,382 + H281DRAFT_02682 0.70 +1.2
265,552 - H281DRAFT_02682 0.82 -0.9
265,865 + -1.9
266,392 - H281DRAFT_02683 0.51 +3.0
266,619 + H281DRAFT_02683 0.73 +2.6
266,914 - +0.6
267,167 + -0.9
267,168 - +1.0
267,255 + H281DRAFT_02684 0.14 -0.1
267,256 - H281DRAFT_02684 0.14 +0.4
267,817 + H281DRAFT_02684 0.50 -0.1

Or see this region's nucleotide sequence