Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02662 and H281DRAFT_02663 are separated by 71 nucleotides H281DRAFT_02663 and H281DRAFT_02664 overlap by 82 nucleotides H281DRAFT_02664 and H281DRAFT_02665 are separated by 15 nucleotides H281DRAFT_02665 and H281DRAFT_02666 are separated by 41 nucleotides H281DRAFT_02666 and H281DRAFT_02667 overlap by 82 nucleotides
H281DRAFT_02662: H281DRAFT_02662 - Predicted xylanase/chitin deacetylase, at 243,868 to 244,770
_02662
H281DRAFT_02663: H281DRAFT_02663 - hypothetical protein, at 244,842 to 245,435
_02663
H281DRAFT_02664: H281DRAFT_02664 - hypothetical protein, at 245,354 to 245,521
_02664
H281DRAFT_02665: H281DRAFT_02665 - Outer membrane protein (porin), at 245,537 to 246,634
_02665
H281DRAFT_02666: H281DRAFT_02666 - hypothetical protein, at 246,676 to 246,837
_02666
H281DRAFT_02667: H281DRAFT_02667 - Outer membrane protein (porin), at 246,756 to 247,799
_02667
Position (kb) 245
246
247 Strain fitness (log2 ratio) -1
0
1
2 at 244.563 kb on - strand, within H281DRAFT_02662 at 244.634 kb on - strand, within H281DRAFT_02662 at 245.513 kb on + strand at 245.539 kb on - strand at 245.546 kb on - strand at 245.680 kb on - strand, within H281DRAFT_02665 at 245.783 kb on - strand, within H281DRAFT_02665 at 245.805 kb on + strand, within H281DRAFT_02665 at 245.851 kb on + strand, within H281DRAFT_02665 at 245.913 kb on + strand, within H281DRAFT_02665 at 246.252 kb on - strand, within H281DRAFT_02665 at 246.365 kb on + strand, within H281DRAFT_02665 at 246.365 kb on + strand, within H281DRAFT_02665 at 246.511 kb on - strand, within H281DRAFT_02665 at 246.517 kb on + strand, within H281DRAFT_02665 at 246.835 kb on + strand at 247.031 kb on - strand, within H281DRAFT_02667 at 247.142 kb on - strand, within H281DRAFT_02667 at 247.156 kb on + strand, within H281DRAFT_02667 at 247.291 kb on + strand, within H281DRAFT_02667
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 244,563 - H281DRAFT_02662 0.77 +0.1 244,634 - H281DRAFT_02662 0.85 +1.1 245,513 + -1.2 245,539 - +0.4 245,546 - -0.4 245,680 - H281DRAFT_02665 0.13 +0.1 245,783 - H281DRAFT_02665 0.22 +2.0 245,805 + H281DRAFT_02665 0.24 -0.7 245,851 + H281DRAFT_02665 0.29 +0.3 245,913 + H281DRAFT_02665 0.34 +0.8 246,252 - H281DRAFT_02665 0.65 +0.2 246,365 + H281DRAFT_02665 0.75 +0.4 246,365 + H281DRAFT_02665 0.75 -0.1 246,511 - H281DRAFT_02665 0.89 +0.2 246,517 + H281DRAFT_02665 0.89 -0.3 246,835 + +0.6 247,031 - H281DRAFT_02667 0.26 +0.3 247,142 - H281DRAFT_02667 0.37 +0.7 247,156 + H281DRAFT_02667 0.38 +0.2 247,291 + H281DRAFT_02667 0.51 +1.1
Or see this region's nucleotide sequence