Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_02622

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_02621 and H281DRAFT_02622 overlap by 4 nucleotidesH281DRAFT_02622 and H281DRAFT_02623 overlap by 20 nucleotides H281DRAFT_02621: H281DRAFT_02621 - Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, at 197,850 to 199,193 _02621 H281DRAFT_02622: H281DRAFT_02622 - hypothetical protein, at 199,190 to 199,357 _02622 H281DRAFT_02623: H281DRAFT_02623 - aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A, at 199,338 to 200,678 _02623 Position (kb) 199 200Strain fitness (log2 ratio) -1 0 1 2at 198.244 kb on - strand, within H281DRAFT_02621at 198.759 kb on + strand, within H281DRAFT_02621at 198.760 kb on - strand, within H281DRAFT_02621at 198.760 kb on - strand, within H281DRAFT_02621at 200.011 kb on - strand, within H281DRAFT_02623at 200.177 kb on + strand, within H281DRAFT_02623at 200.225 kb on - strand, within H281DRAFT_02623at 200.325 kb on + strand, within H281DRAFT_02623

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C)
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198,244 - H281DRAFT_02621 0.29 +0.7
198,759 + H281DRAFT_02621 0.68 +0.6
198,760 - H281DRAFT_02621 0.68 +0.6
198,760 - H281DRAFT_02621 0.68 +0.3
200,011 - H281DRAFT_02623 0.50 +0.2
200,177 + H281DRAFT_02623 0.63 -1.0
200,225 - H281DRAFT_02623 0.66 +0.8
200,325 + H281DRAFT_02623 0.74 +1.8

Or see this region's nucleotide sequence