Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_02193

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_02192 and H281DRAFT_02193 are separated by 308 nucleotidesH281DRAFT_02193 and H281DRAFT_02194 are separated by 60 nucleotides H281DRAFT_02192: H281DRAFT_02192 - MFS transporter, YNFM family, putative membrane transport protein, at 333,825 to 335,030 _02192 H281DRAFT_02193: H281DRAFT_02193 - hypothetical protein, at 335,339 to 335,524 _02193 H281DRAFT_02194: H281DRAFT_02194 - L-glyceraldehyde 3-phosphate reductase, at 335,585 to 336,628 _02194 Position (kb) 335 336Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 334.548 kb on + strand, within H281DRAFT_02192at 334.548 kb on + strand, within H281DRAFT_02192at 334.548 kb on + strand, within H281DRAFT_02192at 334.554 kb on + strand, within H281DRAFT_02192at 334.554 kb on + strand, within H281DRAFT_02192at 334.554 kb on + strand, within H281DRAFT_02192at 334.554 kb on + strand, within H281DRAFT_02192at 334.555 kb on - strand, within H281DRAFT_02192at 334.555 kb on - strand, within H281DRAFT_02192at 334.555 kb on - strand, within H281DRAFT_02192at 334.555 kb on - strand, within H281DRAFT_02192at 334.555 kb on - strand, within H281DRAFT_02192at 334.555 kb on - strand, within H281DRAFT_02192at 334.626 kb on + strand, within H281DRAFT_02192at 334.626 kb on + strand, within H281DRAFT_02192at 334.626 kb on + strand, within H281DRAFT_02192at 334.627 kb on - strand, within H281DRAFT_02192at 334.627 kb on - strand, within H281DRAFT_02192at 334.627 kb on - strand, within H281DRAFT_02192at 334.872 kb on + strand, within H281DRAFT_02192at 334.873 kb on - strand, within H281DRAFT_02192at 334.884 kb on + strand, within H281DRAFT_02192at 334.884 kb on + strand, within H281DRAFT_02192at 334.884 kb on + strandat 334.884 kb on + strand, within H281DRAFT_02192at 334.885 kb on - strand, within H281DRAFT_02192at 334.885 kb on - strand, within H281DRAFT_02192at 334.887 kb on + strand, within H281DRAFT_02192at 334.887 kb on + strand, within H281DRAFT_02192at 334.887 kb on + strand, within H281DRAFT_02192at 334.887 kb on + strand, within H281DRAFT_02192at 334.887 kb on + strand, within H281DRAFT_02192at 334.915 kb on - strandat 335.227 kb on - strandat 335.240 kb on - strandat 335.260 kb on + strandat 335.260 kb on + strandat 335.260 kb on + strandat 335.260 kb on + strandat 335.260 kb on + strandat 335.260 kb on + strandat 335.261 kb on - strandat 335.261 kb on - strandat 335.261 kb on - strandat 335.261 kb on - strandat 335.261 kb on - strandat 335.263 kb on - strandat 335.263 kb on - strandat 335.338 kb on + strandat 335.338 kb on + strandat 335.338 kb on + strandat 335.338 kb on + strandat 335.339 kb on - strandat 335.409 kb on + strand, within H281DRAFT_02193at 335.479 kb on - strand, within H281DRAFT_02193at 335.520 kb on + strandat 335.520 kb on + strandat 335.834 kb on + strand, within H281DRAFT_02194at 335.834 kb on + strand, within H281DRAFT_02194at 335.834 kb on + strand, within H281DRAFT_02194at 335.835 kb on - strand, within H281DRAFT_02194at 335.835 kb on - strand, within H281DRAFT_02194at 335.835 kb on - strand, within H281DRAFT_02194at 335.835 kb on - strand, within H281DRAFT_02194at 335.928 kb on + strand, within H281DRAFT_02194at 335.928 kb on + strand, within H281DRAFT_02194at 335.928 kb on + strand, within H281DRAFT_02194at 335.929 kb on - strand, within H281DRAFT_02194at 335.929 kb on - strand, within H281DRAFT_02194at 336.039 kb on + strand, within H281DRAFT_02194at 336.039 kb on + strand, within H281DRAFT_02194at 336.072 kb on + strand, within H281DRAFT_02194at 336.135 kb on + strand, within H281DRAFT_02194at 336.135 kb on + strand, within H281DRAFT_02194at 336.135 kb on + strand, within H281DRAFT_02194at 336.136 kb on - strand, within H281DRAFT_02194at 336.136 kb on - strand, within H281DRAFT_02194at 336.234 kb on + strand, within H281DRAFT_02194at 336.235 kb on - strand, within H281DRAFT_02194at 336.282 kb on + strand, within H281DRAFT_02194at 336.282 kb on + strand, within H281DRAFT_02194at 336.282 kb on + strand, within H281DRAFT_02194at 336.282 kb on + strand, within H281DRAFT_02194at 336.282 kb on + strand, within H281DRAFT_02194at 336.283 kb on - strand, within H281DRAFT_02194at 336.283 kb on - strand, within H281DRAFT_02194at 336.283 kb on - strand, within H281DRAFT_02194at 336.283 kb on - strand, within H281DRAFT_02194at 336.420 kb on + strand, within H281DRAFT_02194at 336.432 kb on + strand, within H281DRAFT_02194at 336.432 kb on + strand, within H281DRAFT_02194at 336.432 kb on + strand, within H281DRAFT_02194at 336.433 kb on - strand, within H281DRAFT_02194at 336.515 kb on - strand, within H281DRAFT_02194

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C)
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334,548 + H281DRAFT_02192 0.60 +0.1
334,548 + H281DRAFT_02192 0.60 +0.4
334,548 + H281DRAFT_02192 0.60 +0.3
334,554 + H281DRAFT_02192 0.60 +0.4
334,554 + H281DRAFT_02192 0.60 -0.2
334,554 + H281DRAFT_02192 0.60 +0.2
334,554 + H281DRAFT_02192 0.60 +0.7
334,555 - H281DRAFT_02192 0.61 -0.8
334,555 - H281DRAFT_02192 0.61 +0.9
334,555 - H281DRAFT_02192 0.61 +0.1
334,555 - H281DRAFT_02192 0.61 -0.7
334,555 - H281DRAFT_02192 0.61 +0.0
334,555 - H281DRAFT_02192 0.61 +0.2
334,626 + H281DRAFT_02192 0.66 -0.8
334,626 + H281DRAFT_02192 0.66 -4.4
334,626 + H281DRAFT_02192 0.66 -2.2
334,627 - H281DRAFT_02192 0.67 +1.2
334,627 - H281DRAFT_02192 0.67 +0.5
334,627 - H281DRAFT_02192 0.67 +1.0
334,872 + H281DRAFT_02192 0.87 -1.0
334,873 - H281DRAFT_02192 0.87 -0.2
334,884 + H281DRAFT_02192 0.88 -1.0
334,884 + H281DRAFT_02192 0.88 +1.6
334,884 + -0.1
334,884 + H281DRAFT_02192 0.88 -0.7
334,885 - H281DRAFT_02192 0.88 -0.8
334,885 - H281DRAFT_02192 0.88 +0.2
334,887 + H281DRAFT_02192 0.88 -0.5
334,887 + H281DRAFT_02192 0.88 +1.8
334,887 + H281DRAFT_02192 0.88 -0.3
334,887 + H281DRAFT_02192 0.88 +0.1
334,887 + H281DRAFT_02192 0.88 -0.2
334,915 - -0.1
335,227 - +0.4
335,240 - -0.5
335,260 + +0.9
335,260 + +1.0
335,260 + +0.7
335,260 + +0.7
335,260 + +0.1
335,260 + -0.9
335,261 - +0.2
335,261 - -0.3
335,261 - +0.1
335,261 - -0.2
335,261 - -2.3
335,263 - +0.5
335,263 - +0.3
335,338 + -0.4
335,338 + -0.7
335,338 + +0.4
335,338 + +0.5
335,339 - +0.0
335,409 + H281DRAFT_02193 0.38 +0.2
335,479 - H281DRAFT_02193 0.75 +1.1
335,520 + +0.0
335,520 + -0.4
335,834 + H281DRAFT_02194 0.24 -0.4
335,834 + H281DRAFT_02194 0.24 +0.3
335,834 + H281DRAFT_02194 0.24 -0.1
335,835 - H281DRAFT_02194 0.24 +0.4
335,835 - H281DRAFT_02194 0.24 +0.3
335,835 - H281DRAFT_02194 0.24 +0.8
335,835 - H281DRAFT_02194 0.24 -0.6
335,928 + H281DRAFT_02194 0.33 -0.3
335,928 + H281DRAFT_02194 0.33 +0.8
335,928 + H281DRAFT_02194 0.33 +0.7
335,929 - H281DRAFT_02194 0.33 +0.7
335,929 - H281DRAFT_02194 0.33 +0.1
336,039 + H281DRAFT_02194 0.43 +1.1
336,039 + H281DRAFT_02194 0.43 +0.1
336,072 + H281DRAFT_02194 0.47 +1.0
336,135 + H281DRAFT_02194 0.53 -0.2
336,135 + H281DRAFT_02194 0.53 +1.3
336,135 + H281DRAFT_02194 0.53 -1.0
336,136 - H281DRAFT_02194 0.53 -0.2
336,136 - H281DRAFT_02194 0.53 -0.1
336,234 + H281DRAFT_02194 0.62 -0.2
336,235 - H281DRAFT_02194 0.62 +0.1
336,282 + H281DRAFT_02194 0.67 +0.0
336,282 + H281DRAFT_02194 0.67 +0.9
336,282 + H281DRAFT_02194 0.67 -0.4
336,282 + H281DRAFT_02194 0.67 +2.5
336,282 + H281DRAFT_02194 0.67 +0.4
336,283 - H281DRAFT_02194 0.67 -0.2
336,283 - H281DRAFT_02194 0.67 +0.1
336,283 - H281DRAFT_02194 0.67 +0.7
336,283 - H281DRAFT_02194 0.67 -0.9
336,420 + H281DRAFT_02194 0.80 +0.9
336,432 + H281DRAFT_02194 0.81 +0.1
336,432 + H281DRAFT_02194 0.81 +0.2
336,432 + H281DRAFT_02194 0.81 -0.3
336,433 - H281DRAFT_02194 0.81 -0.9
336,515 - H281DRAFT_02194 0.89 +0.9

Or see this region's nucleotide sequence