Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02172 and H281DRAFT_02173 are separated by 109 nucleotides H281DRAFT_02173 and H281DRAFT_02174 are separated by 192 nucleotides
H281DRAFT_02172: H281DRAFT_02172 - transcriptional regulator, LacI family, at 312,194 to 313,246
_02172
H281DRAFT_02173: H281DRAFT_02173 - monosaccharide ABC transporter substrate-binding protein, CUT2 family, at 313,356 to 314,387
_02173
H281DRAFT_02174: H281DRAFT_02174 - monosaccharide ABC transporter ATP-binding protein, CUT2 family, at 314,580 to 316,232
_02174
Position (kb) 313
314
315 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 312.572 kb on + strand, within H281DRAFT_02172 at 312.573 kb on - strand, within H281DRAFT_02172 at 312.573 kb on - strand, within H281DRAFT_02172 at 312.635 kb on + strand, within H281DRAFT_02172 at 312.636 kb on - strand, within H281DRAFT_02172 at 312.704 kb on + strand, within H281DRAFT_02172 at 312.705 kb on - strand, within H281DRAFT_02172 at 312.737 kb on + strand, within H281DRAFT_02172 at 312.737 kb on + strand, within H281DRAFT_02172 at 312.737 kb on + strand, within H281DRAFT_02172 at 312.739 kb on + strand, within H281DRAFT_02172 at 312.739 kb on + strand, within H281DRAFT_02172 at 313.073 kb on + strand, within H281DRAFT_02172 at 313.074 kb on - strand, within H281DRAFT_02172 at 313.074 kb on - strand, within H281DRAFT_02172 at 313.204 kb on + strand at 313.255 kb on - strand at 313.270 kb on - strand at 313.270 kb on - strand at 313.328 kb on + strand at 313.329 kb on - strand at 313.784 kb on + strand, within H281DRAFT_02173 at 313.784 kb on + strand, within H281DRAFT_02173 at 313.821 kb on + strand, within H281DRAFT_02173 at 313.821 kb on + strand, within H281DRAFT_02173 at 313.822 kb on - strand, within H281DRAFT_02173 at 314.343 kb on + strand at 314.383 kb on - strand at 314.526 kb on + strand at 314.526 kb on + strand at 314.526 kb on + strand at 314.527 kb on - strand at 314.558 kb on + strand at 314.559 kb on - strand at 314.636 kb on + strand at 314.636 kb on + strand at 314.637 kb on - strand at 314.637 kb on - strand at 314.647 kb on + strand at 314.892 kb on + strand, within H281DRAFT_02174 at 314.893 kb on - strand, within H281DRAFT_02174 at 315.010 kb on + strand, within H281DRAFT_02174 at 315.011 kb on - strand, within H281DRAFT_02174 at 315.011 kb on - strand, within H281DRAFT_02174 at 315.175 kb on + strand, within H281DRAFT_02174 at 315.175 kb on + strand at 315.175 kb on + strand, within H281DRAFT_02174 at 315.175 kb on + strand, within H281DRAFT_02174 at 315.176 kb on - strand, within H281DRAFT_02174 at 315.176 kb on - strand, within H281DRAFT_02174 at 315.250 kb on - strand, within H281DRAFT_02174 at 315.250 kb on - strand, within H281DRAFT_02174 at 315.349 kb on + strand, within H281DRAFT_02174 at 315.356 kb on + strand, within H281DRAFT_02174
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 312,572 + H281DRAFT_02172 0.36 -0.8 312,573 - H281DRAFT_02172 0.36 -0.3 312,573 - H281DRAFT_02172 0.36 +1.1 312,635 + H281DRAFT_02172 0.42 +0.9 312,636 - H281DRAFT_02172 0.42 -0.5 312,704 + H281DRAFT_02172 0.48 -1.4 312,705 - H281DRAFT_02172 0.49 -0.2 312,737 + H281DRAFT_02172 0.52 -0.7 312,737 + H281DRAFT_02172 0.52 +0.1 312,737 + H281DRAFT_02172 0.52 +0.8 312,739 + H281DRAFT_02172 0.52 +0.2 312,739 + H281DRAFT_02172 0.52 -0.2 313,073 + H281DRAFT_02172 0.83 +1.0 313,074 - H281DRAFT_02172 0.84 -0.6 313,074 - H281DRAFT_02172 0.84 -2.9 313,204 + +0.3 313,255 - +0.2 313,270 - -0.1 313,270 - +0.4 313,328 + -1.1 313,329 - -0.4 313,784 + H281DRAFT_02173 0.41 +1.0 313,784 + H281DRAFT_02173 0.41 -0.8 313,821 + H281DRAFT_02173 0.45 +0.6 313,821 + H281DRAFT_02173 0.45 +1.2 313,822 - H281DRAFT_02173 0.45 +0.9 314,343 + -0.9 314,383 - -0.4 314,526 + -1.1 314,526 + +1.7 314,526 + -0.3 314,527 - -0.4 314,558 + -0.2 314,559 - +0.5 314,636 + -0.4 314,636 + +0.1 314,637 - +0.4 314,637 - +0.0 314,647 + -0.4 314,892 + H281DRAFT_02174 0.19 -0.5 314,893 - H281DRAFT_02174 0.19 +0.4 315,010 + H281DRAFT_02174 0.26 -0.1 315,011 - H281DRAFT_02174 0.26 +0.1 315,011 - H281DRAFT_02174 0.26 +0.3 315,175 + H281DRAFT_02174 0.36 +0.1 315,175 + -0.1 315,175 + H281DRAFT_02174 0.36 +0.4 315,175 + H281DRAFT_02174 0.36 +0.5 315,176 - H281DRAFT_02174 0.36 +1.5 315,176 - H281DRAFT_02174 0.36 +0.3 315,250 - H281DRAFT_02174 0.41 -3.0 315,250 - H281DRAFT_02174 0.41 +2.9 315,349 + H281DRAFT_02174 0.47 +0.8 315,356 + H281DRAFT_02174 0.47 +0.1
Or see this region's nucleotide sequence