Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02057 and H281DRAFT_02058 are separated by 31 nucleotides H281DRAFT_02058 and H281DRAFT_02059 are separated by 30 nucleotides
H281DRAFT_02057: H281DRAFT_02057 - VanZ like family protein, at 179,607 to 180,770
_02057
H281DRAFT_02058: H281DRAFT_02058 - cholesterol transport system auxiliary component, at 180,802 to 181,443
_02058
H281DRAFT_02059: H281DRAFT_02059 - phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein, at 181,474 to 182,436
_02059
Position (kb) 180
181
182 Strain fitness (log2 ratio) -1
0
1
2
3 at 179.957 kb on + strand, within H281DRAFT_02057 at 179.958 kb on - strand, within H281DRAFT_02057 at 179.991 kb on - strand, within H281DRAFT_02057 at 179.991 kb on - strand, within H281DRAFT_02057 at 179.994 kb on + strand, within H281DRAFT_02057 at 179.994 kb on + strand, within H281DRAFT_02057 at 179.994 kb on + strand, within H281DRAFT_02057 at 179.994 kb on + strand, within H281DRAFT_02057 at 179.995 kb on - strand, within H281DRAFT_02057 at 179.995 kb on - strand, within H281DRAFT_02057 at 180.221 kb on + strand, within H281DRAFT_02057 at 180.250 kb on + strand, within H281DRAFT_02057 at 180.250 kb on + strand, within H281DRAFT_02057 at 180.250 kb on + strand, within H281DRAFT_02057 at 180.251 kb on - strand, within H281DRAFT_02057 at 180.251 kb on - strand, within H281DRAFT_02057 at 180.251 kb on - strand, within H281DRAFT_02057 at 180.324 kb on + strand, within H281DRAFT_02057 at 180.325 kb on - strand, within H281DRAFT_02057 at 180.325 kb on - strand, within H281DRAFT_02057 at 180.448 kb on + strand, within H281DRAFT_02057 at 180.449 kb on - strand, within H281DRAFT_02057 at 180.449 kb on - strand, within H281DRAFT_02057 at 180.553 kb on - strand, within H281DRAFT_02057 at 180.572 kb on - strand, within H281DRAFT_02057 at 180.572 kb on - strand, within H281DRAFT_02057 at 180.691 kb on + strand at 180.692 kb on - strand at 180.692 kb on - strand at 180.710 kb on - strand at 180.710 kb on - strand at 181.311 kb on - strand, within H281DRAFT_02058 at 181.504 kb on - strand at 181.815 kb on + strand, within H281DRAFT_02059 at 181.815 kb on + strand at 182.194 kb on - strand, within H281DRAFT_02059 at 182.265 kb on + strand, within H281DRAFT_02059 at 182.265 kb on + strand, within H281DRAFT_02059 at 182.265 kb on + strand, within H281DRAFT_02059 at 182.268 kb on - strand, within H281DRAFT_02059 at 182.268 kb on - strand, within H281DRAFT_02059 at 182.299 kb on + strand, within H281DRAFT_02059 at 182.300 kb on - strand, within H281DRAFT_02059 at 182.325 kb on - strand, within H281DRAFT_02059 at 182.398 kb on - strand at 182.398 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 179,957 + H281DRAFT_02057 0.30 +0.7 179,958 - H281DRAFT_02057 0.30 +0.5 179,991 - H281DRAFT_02057 0.33 +0.1 179,991 - H281DRAFT_02057 0.33 +0.5 179,994 + H281DRAFT_02057 0.33 -1.2 179,994 + H281DRAFT_02057 0.33 +1.0 179,994 + H281DRAFT_02057 0.33 +0.3 179,994 + H281DRAFT_02057 0.33 +1.3 179,995 - H281DRAFT_02057 0.33 -0.2 179,995 - H281DRAFT_02057 0.33 +0.3 180,221 + H281DRAFT_02057 0.53 +0.4 180,250 + H281DRAFT_02057 0.55 -0.7 180,250 + H281DRAFT_02057 0.55 -0.0 180,250 + H281DRAFT_02057 0.55 +0.4 180,251 - H281DRAFT_02057 0.55 +1.2 180,251 - H281DRAFT_02057 0.55 -0.2 180,251 - H281DRAFT_02057 0.55 +0.3 180,324 + H281DRAFT_02057 0.62 -0.3 180,325 - H281DRAFT_02057 0.62 -0.4 180,325 - H281DRAFT_02057 0.62 +0.4 180,448 + H281DRAFT_02057 0.72 -0.3 180,449 - H281DRAFT_02057 0.72 +0.4 180,449 - H281DRAFT_02057 0.72 -0.9 180,553 - H281DRAFT_02057 0.81 -1.5 180,572 - H281DRAFT_02057 0.83 +0.7 180,572 - H281DRAFT_02057 0.83 +0.2 180,691 + +0.5 180,692 - +0.1 180,692 - +0.4 180,710 - +0.2 180,710 - +0.3 181,311 - H281DRAFT_02058 0.79 +0.8 181,504 - +0.1 181,815 + H281DRAFT_02059 0.35 +0.6 181,815 + +3.2 182,194 - H281DRAFT_02059 0.75 -0.3 182,265 + H281DRAFT_02059 0.82 +0.6 182,265 + H281DRAFT_02059 0.82 +0.6 182,265 + H281DRAFT_02059 0.82 +0.5 182,268 - H281DRAFT_02059 0.82 +0.6 182,268 - H281DRAFT_02059 0.82 +0.3 182,299 + H281DRAFT_02059 0.86 +1.1 182,300 - H281DRAFT_02059 0.86 +1.2 182,325 - H281DRAFT_02059 0.88 -0.2 182,398 - -0.2 182,398 - +0.2
Or see this region's nucleotide sequence