Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01779 and H281DRAFT_01780 are separated by 139 nucleotides H281DRAFT_01780 and H281DRAFT_01781 are separated by 23 nucleotides H281DRAFT_01781 and H281DRAFT_01782 are separated by 54 nucleotides
H281DRAFT_01779: H281DRAFT_01779 - DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains, at 681,414 to 682,790
_01779
H281DRAFT_01780: H281DRAFT_01780 - hypothetical protein, at 682,930 to 683,742
_01780
H281DRAFT_01781: H281DRAFT_01781 - hypothetical protein, at 683,766 to 684,332
_01781
H281DRAFT_01782: H281DRAFT_01782 - Predicted arabinose efflux permease, MFS family, at 684,387 to 685,697
_01782
Position (kb) 683
684
685 Strain fitness (log2 ratio) -2
-1
0
1
2 at 682.867 kb on - strand at 682.889 kb on - strand at 683.229 kb on + strand, within H281DRAFT_01780 at 683.723 kb on - strand at 683.741 kb on - strand at 683.741 kb on - strand at 683.760 kb on + strand at 683.760 kb on + strand at 684.226 kb on + strand, within H281DRAFT_01781 at 684.525 kb on + strand, within H281DRAFT_01782 at 684.692 kb on + strand, within H281DRAFT_01782 at 684.692 kb on + strand, within H281DRAFT_01782 at 684.693 kb on - strand, within H281DRAFT_01782 at 684.934 kb on + strand, within H281DRAFT_01782
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 682,867 - +0.5 682,889 - +0.4 683,229 + H281DRAFT_01780 0.37 +1.7 683,723 - +0.5 683,741 - -1.3 683,741 - +1.5 683,760 + -1.9 683,760 + -0.4 684,226 + H281DRAFT_01781 0.81 -1.4 684,525 + H281DRAFT_01782 0.11 +0.8 684,692 + H281DRAFT_01782 0.23 +0.2 684,692 + H281DRAFT_01782 0.23 +0.8 684,693 - H281DRAFT_01782 0.23 +2.0 684,934 + H281DRAFT_01782 0.42 +0.4
Or see this region's nucleotide sequence