Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01551 and H281DRAFT_01552 are separated by 50 nucleotides H281DRAFT_01552 and H281DRAFT_01553 are separated by 192 nucleotides H281DRAFT_01553 and H281DRAFT_01554 are separated by 148 nucleotides
H281DRAFT_01551: H281DRAFT_01551 - efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family, at 424,326 to 425,819
_01551
H281DRAFT_01552: H281DRAFT_01552 - DNA-binding transcriptional regulator, MarR family, at 425,870 to 426,307
_01552
H281DRAFT_01553: H281DRAFT_01553 - Uncharacterized conserved protein, DUF1330 family, at 426,500 to 426,787
_01553
H281DRAFT_01554: H281DRAFT_01554 - RNA polymerase sigma-70 factor, ECF subfamily, at 426,936 to 427,439
_01554
Position (kb) 425
426
427 Strain fitness (log2 ratio) -2
-1
0
1 at 425.369 kb on - strand, within H281DRAFT_01551 at 425.467 kb on + strand, within H281DRAFT_01551 at 425.681 kb on + strand at 425.682 kb on - strand at 426.107 kb on + strand, within H281DRAFT_01552 at 426.298 kb on - strand at 426.350 kb on + strand at 426.501 kb on + strand at 426.501 kb on + strand at 426.775 kb on + strand at 426.777 kb on + strand at 426.777 kb on + strand at 426.777 kb on + strand at 426.778 kb on - strand at 426.778 kb on - strand at 426.778 kb on - strand at 426.778 kb on - strand at 426.792 kb on + strand at 426.792 kb on + strand at 426.820 kb on + strand at 427.081 kb on + strand, within H281DRAFT_01554
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 425,369 - H281DRAFT_01551 0.70 -0.3 425,467 + H281DRAFT_01551 0.76 -0.9 425,681 + -0.1 425,682 - +1.5 426,107 + H281DRAFT_01552 0.54 +0.3 426,298 - +0.2 426,350 + +0.9 426,501 + -1.0 426,501 + +0.3 426,775 + -0.9 426,777 + -2.1 426,777 + +0.9 426,777 + -0.1 426,778 - +0.1 426,778 - +1.1 426,778 - +0.1 426,778 - -0.2 426,792 + -1.1 426,792 + -0.4 426,820 + -0.9 427,081 + H281DRAFT_01554 0.29 -0.2
Or see this region's nucleotide sequence