Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01476 and H281DRAFT_01477 are separated by 45 nucleotides H281DRAFT_01477 and H281DRAFT_01478 are separated by 78 nucleotides H281DRAFT_01478 and H281DRAFT_01479 overlap by 8 nucleotides
H281DRAFT_01476: H281DRAFT_01476 - diguanylate cyclase/phosphodiesterase, at 344,403 to 346,481
_01476
H281DRAFT_01477: H281DRAFT_01477 - protein CcmA, bactofilin family, at 346,527 to 346,943
_01477
H281DRAFT_01478: H281DRAFT_01478 - hypothetical protein, at 347,022 to 347,432
_01478
H281DRAFT_01479: H281DRAFT_01479 - Membrane proteins related to metalloendopeptidases, at 347,425 to 348,402
_01479
Position (kb) 347
348 Strain fitness (log2 ratio) -2
-1
0
1 at 346.180 kb on - strand, within H281DRAFT_01476 at 346.195 kb on - strand, within H281DRAFT_01476 at 346.327 kb on + strand at 346.639 kb on + strand, within H281DRAFT_01477 at 346.640 kb on - strand, within H281DRAFT_01477 at 346.642 kb on + strand, within H281DRAFT_01477 at 346.642 kb on + strand, within H281DRAFT_01477 at 346.943 kb on + strand at 346.944 kb on - strand at 346.947 kb on + strand at 347.380 kb on + strand, within H281DRAFT_01478 at 347.459 kb on + strand at 347.551 kb on - strand, within H281DRAFT_01479 at 347.610 kb on - strand, within H281DRAFT_01479 at 347.639 kb on - strand, within H281DRAFT_01479 at 347.843 kb on + strand, within H281DRAFT_01479 at 347.843 kb on + strand, within H281DRAFT_01479 at 347.843 kb on + strand, within H281DRAFT_01479 at 347.843 kb on + strand, within H281DRAFT_01479 at 348.425 kb on + strand at 348.426 kb on - strand at 348.426 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 346,180 - H281DRAFT_01476 0.85 -1.1 346,195 - H281DRAFT_01476 0.86 +0.0 346,327 + -0.1 346,639 + H281DRAFT_01477 0.27 -0.4 346,640 - H281DRAFT_01477 0.27 +0.6 346,642 + H281DRAFT_01477 0.28 +0.9 346,642 + H281DRAFT_01477 0.28 -0.2 346,943 + +0.3 346,944 - +0.2 346,947 + -0.0 347,380 + H281DRAFT_01478 0.87 -1.8 347,459 + +0.2 347,551 - H281DRAFT_01479 0.13 +0.4 347,610 - H281DRAFT_01479 0.19 -0.5 347,639 - H281DRAFT_01479 0.22 +0.0 347,843 + H281DRAFT_01479 0.43 -0.3 347,843 + H281DRAFT_01479 0.43 -0.3 347,843 + H281DRAFT_01479 0.43 -0.2 347,843 + H281DRAFT_01479 0.43 -0.7 348,425 + +0.3 348,426 - -0.4 348,426 - +0.7
Or see this region's nucleotide sequence