Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01340 and H281DRAFT_01341 are separated by 223 nucleotides H281DRAFT_01341 and H281DRAFT_01342 are separated by 46 nucleotides H281DRAFT_01342 and H281DRAFT_01343 are separated by 40 nucleotides
H281DRAFT_01340: H281DRAFT_01340 - phosphoglycolate phosphatase, at 181,886 to 182,578
_01340
H281DRAFT_01341: H281DRAFT_01341 - Protein of unknown function (DUF1488), at 182,802 to 183,080
_01341
H281DRAFT_01342: H281DRAFT_01342 - ABC-type phosphate/phosphonate transport system, substrate-binding protein, at 183,127 to 183,918
_01342
H281DRAFT_01343: H281DRAFT_01343 - 3-methylcrotonoyl-CoA carboxylase, alpha subunit, at 183,959 to 185,992
_01343
Position (kb) 183
184 Strain fitness (log2 ratio) -2
-1
0
1 at 182.154 kb on - strand, within H281DRAFT_01340 at 182.394 kb on + strand, within H281DRAFT_01340 at 182.462 kb on - strand, within H281DRAFT_01340 at 182.483 kb on + strand, within H281DRAFT_01340 at 182.489 kb on + strand, within H281DRAFT_01340 at 182.632 kb on - strand at 182.811 kb on + strand at 182.811 kb on + strand at 183.081 kb on + strand at 183.081 kb on + strand at 183.094 kb on + strand at 183.095 kb on - strand at 183.106 kb on + strand at 183.154 kb on + strand at 183.154 kb on + strand at 183.466 kb on + strand, within H281DRAFT_01342 at 183.503 kb on + strand, within H281DRAFT_01342 at 183.623 kb on + strand, within H281DRAFT_01342 at 183.689 kb on + strand, within H281DRAFT_01342 at 183.972 kb on - strand at 184.262 kb on - strand, within H281DRAFT_01343 at 184.304 kb on + strand, within H281DRAFT_01343
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 182,154 - H281DRAFT_01340 0.39 -0.5 182,394 + H281DRAFT_01340 0.73 -0.4 182,462 - H281DRAFT_01340 0.83 -1.1 182,483 + H281DRAFT_01340 0.86 +0.1 182,489 + H281DRAFT_01340 0.87 -1.3 182,632 - +0.8 182,811 + +0.2 182,811 + -1.7 183,081 + -0.4 183,081 + -0.1 183,094 + -2.3 183,095 - +0.1 183,106 + +0.1 183,154 + +0.1 183,154 + +0.8 183,466 + H281DRAFT_01342 0.43 +0.2 183,503 + H281DRAFT_01342 0.47 +0.1 183,623 + H281DRAFT_01342 0.63 +0.9 183,689 + H281DRAFT_01342 0.71 -0.7 183,972 - -0.4 184,262 - H281DRAFT_01343 0.15 -0.5 184,304 + H281DRAFT_01343 0.17 +0.8
Or see this region's nucleotide sequence