Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01269 and H281DRAFT_01270 are separated by 157 nucleotides H281DRAFT_01270 and H281DRAFT_01271 are separated by 62 nucleotides H281DRAFT_01271 and H281DRAFT_01272 are separated by 442 nucleotides
H281DRAFT_01269: H281DRAFT_01269 - DNA-binding transcriptional regulator, LysR family, at 102,876 to 103,886
_01269
H281DRAFT_01270: H281DRAFT_01270 - Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains, at 104,044 to 104,799
_01270
H281DRAFT_01271: H281DRAFT_01271 - diguanylate cyclase (GGDEF) domain-containing protein, at 104,862 to 106,040
_01271
H281DRAFT_01272: H281DRAFT_01272 - hypothetical protein, at 106,483 to 107,670
_01272
Position (kb) 104
105
106
107 Strain fitness (log2 ratio) -2
-1
0
1 at 104.416 kb on + strand, within H281DRAFT_01270 at 104.416 kb on + strand, within H281DRAFT_01270 at 104.417 kb on - strand, within H281DRAFT_01270 at 104.639 kb on - strand, within H281DRAFT_01270 at 104.867 kb on + strand at 105.466 kb on + strand, within H281DRAFT_01271 at 105.679 kb on + strand, within H281DRAFT_01271 at 106.215 kb on + strand at 106.215 kb on + strand at 106.216 kb on - strand at 106.216 kb on - strand at 106.277 kb on - strand at 106.441 kb on + strand at 106.764 kb on + strand, within H281DRAFT_01272 at 106.931 kb on - strand, within H281DRAFT_01272
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 104,416 + H281DRAFT_01270 0.49 +0.5 104,416 + H281DRAFT_01270 0.49 +0.4 104,417 - H281DRAFT_01270 0.49 +0.9 104,639 - H281DRAFT_01270 0.79 +0.9 104,867 + -0.8 105,466 + H281DRAFT_01271 0.51 +0.9 105,679 + H281DRAFT_01271 0.69 -0.5 106,215 + -0.8 106,215 + -1.8 106,216 - +0.5 106,216 - -0.3 106,277 - -0.8 106,441 + -1.5 106,764 + H281DRAFT_01272 0.24 +0.9 106,931 - H281DRAFT_01272 0.38 -0.3
Or see this region's nucleotide sequence