Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_01222

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_01221 and H281DRAFT_01222 overlap by 8 nucleotidesH281DRAFT_01222 and H281DRAFT_01223 overlap by 4 nucleotides H281DRAFT_01221: H281DRAFT_01221 - monosaccharide ABC transporter membrane protein, CUT2 family, at 59,020 to 60,036 _01221 H281DRAFT_01222: H281DRAFT_01222 - monosaccharide ABC transporter membrane protein, CUT2 family, at 60,029 to 61,090 _01222 H281DRAFT_01223: H281DRAFT_01223 - monosaccharide ABC transporter ATP-binding protein, CUT2 family, at 61,087 to 62,616 _01223 Position (kb) 60 61 62Strain fitness (log2 ratio) -1 0 1at 59.974 kb on + strandat 60.438 kb on + strand, within H281DRAFT_01222at 61.293 kb on + strand, within H281DRAFT_01223at 61.663 kb on + strand, within H281DRAFT_01223at 62.017 kb on + strand, within H281DRAFT_01223at 62.039 kb on - strand, within H281DRAFT_01223

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C)
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59,974 + +1.1
60,438 + H281DRAFT_01222 0.39 -0.9
61,293 + H281DRAFT_01223 0.13 +0.4
61,663 + H281DRAFT_01223 0.38 +0.6
62,017 + H281DRAFT_01223 0.61 +0.3
62,039 - H281DRAFT_01223 0.62 -0.0

Or see this region's nucleotide sequence