Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01163 and H281DRAFT_01164 are separated by 83 nucleotides H281DRAFT_01164 and H281DRAFT_01165 are separated by 120 nucleotides H281DRAFT_01165 and H281DRAFT_01166 are separated by 156 nucleotides H281DRAFT_01166 and H281DRAFT_01167 are separated by 252 nucleotides
H281DRAFT_01163: H281DRAFT_01163 - hypothetical protein, at 1,311,938 to 1,312,306
_01163
H281DRAFT_01164: H281DRAFT_01164 - hypothetical protein, at 1,312,390 to 1,312,659
_01164
H281DRAFT_01165: H281DRAFT_01165 - hypothetical protein, at 1,312,780 to 1,313,031
_01165
H281DRAFT_01166: H281DRAFT_01166 - p-hydroxybenzoate 3-monooxygenase, at 1,313,188 to 1,314,366
_01166
H281DRAFT_01167: H281DRAFT_01167 - threonine ammonia-lyase, biosynthetic, long form, at 1,314,619 to 1,315,464
_01167
Position (kb)
1313
1314
1315 Strain fitness (log2 ratio)
-1
0
1 at 1312.723 kb on - strand at 1312.821 kb on + strand, within H281DRAFT_01165 at 1312.882 kb on - strand, within H281DRAFT_01165 at 1313.710 kb on - strand, within H281DRAFT_01166 at 1313.998 kb on + strand, within H281DRAFT_01166 at 1314.072 kb on - strand, within H281DRAFT_01166 at 1314.072 kb on - strand, within H281DRAFT_01166 at 1314.479 kb on + strand at 1314.766 kb on - strand, within H281DRAFT_01167 at 1314.903 kb on - strand, within H281DRAFT_01167 at 1314.903 kb on - strand, within H281DRAFT_01167
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 1,312,723 - -0.0 1,312,821 + H281DRAFT_01165 0.16 -1.2 1,312,882 - H281DRAFT_01165 0.40 -0.9 1,313,710 - H281DRAFT_01166 0.44 -1.0 1,313,998 + H281DRAFT_01166 0.69 +0.2 1,314,072 - H281DRAFT_01166 0.75 -0.3 1,314,072 - H281DRAFT_01166 0.75 +0.6 1,314,479 + -0.0 1,314,766 - H281DRAFT_01167 0.17 +0.0 1,314,903 - H281DRAFT_01167 0.34 -0.1 1,314,903 - H281DRAFT_01167 0.34 -1.3
Or see this region's nucleotide sequence