Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00859 and H281DRAFT_00860 are separated by 179 nucleotides H281DRAFT_00860 and H281DRAFT_00861 are separated by 321 nucleotides
H281DRAFT_00859: H281DRAFT_00859 - cystathionine beta-lyase, at 949,861 to 951,045
_00859
H281DRAFT_00860: H281DRAFT_00860 - phosphoserine phosphatase, at 951,225 to 952,064
_00860
H281DRAFT_00861: H281DRAFT_00861 - hypothetical protein, at 952,386 to 953,630
_00861
Position (kb) 951
952
953 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 950.263 kb on + strand, within H281DRAFT_00859 at 950.264 kb on - strand, within H281DRAFT_00859 at 950.822 kb on - strand, within H281DRAFT_00859 at 950.824 kb on - strand, within H281DRAFT_00859 at 950.824 kb on - strand, within H281DRAFT_00859 at 950.898 kb on + strand, within H281DRAFT_00859 at 950.977 kb on + strand at 951.072 kb on + strand at 951.259 kb on + strand at 951.260 kb on - strand at 951.260 kb on - strand at 951.570 kb on + strand, within H281DRAFT_00860 at 952.118 kb on + strand at 952.201 kb on + strand at 952.322 kb on + strand at 952.322 kb on + strand at 952.322 kb on + strand at 952.323 kb on - strand at 952.372 kb on + strand at 952.372 kb on + strand at 952.372 kb on + strand at 952.373 kb on - strand at 952.373 kb on - strand at 952.461 kb on + strand at 952.567 kb on + strand, within H281DRAFT_00861 at 952.567 kb on + strand, within H281DRAFT_00861 at 952.567 kb on + strand, within H281DRAFT_00861 at 952.623 kb on + strand, within H281DRAFT_00861 at 952.992 kb on + strand, within H281DRAFT_00861
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 950,263 + H281DRAFT_00859 0.34 -2.6 950,264 - H281DRAFT_00859 0.34 -0.1 950,822 - H281DRAFT_00859 0.81 -2.4 950,824 - H281DRAFT_00859 0.81 +0.9 950,824 - H281DRAFT_00859 0.81 +0.8 950,898 + H281DRAFT_00859 0.88 +0.3 950,977 + +0.1 951,072 + -0.2 951,259 + -0.6 951,260 - -2.6 951,260 - -5.3 951,570 + H281DRAFT_00860 0.41 -5.3 952,118 + -2.6 952,201 + +0.3 952,322 + +0.5 952,322 + +0.2 952,322 + -1.2 952,323 - +1.0 952,372 + -0.4 952,372 + +2.4 952,372 + +0.3 952,373 - +0.3 952,373 - -0.5 952,461 + -1.5 952,567 + H281DRAFT_00861 0.15 -0.9 952,567 + H281DRAFT_00861 0.15 +0.3 952,567 + H281DRAFT_00861 0.15 +0.6 952,623 + H281DRAFT_00861 0.19 +1.0 952,992 + H281DRAFT_00861 0.49 +0.8
Or see this region's nucleotide sequence