Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_00715

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_00713 and H281DRAFT_00714 are separated by 64 nucleotidesH281DRAFT_00714 and H281DRAFT_00715 are separated by 63 nucleotidesH281DRAFT_00715 and H281DRAFT_00716 are separated by 167 nucleotides H281DRAFT_00713: H281DRAFT_00713 - 23S rRNA Gm-2251 2'-O-methyltransferase, at 801,814 to 802,557 _00713 H281DRAFT_00714: H281DRAFT_00714 - ribose-5-phosphate isomerase, at 802,622 to 803,317 _00714 H281DRAFT_00715: H281DRAFT_00715 - Glycosyltransferase involved in cell wall bisynthesis, at 803,381 to 804,709 _00715 H281DRAFT_00716: H281DRAFT_00716 - Glycosyltransferase involved in cell wall bisynthesis, at 804,877 to 806,094 _00716 Position (kb) 803 804 805Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 802.555 kb on + strandat 803.461 kb on - strandat 804.045 kb on + strand, within H281DRAFT_00715at 804.287 kb on + strand, within H281DRAFT_00715at 804.288 kb on - strand, within H281DRAFT_00715at 804.830 kb on + strandat 805.078 kb on + strand, within H281DRAFT_00716at 805.078 kb on + strand, within H281DRAFT_00716at 805.137 kb on + strand, within H281DRAFT_00716at 805.247 kb on - strand, within H281DRAFT_00716

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C)
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802,555 + -0.1
803,461 - +3.3
804,045 + H281DRAFT_00715 0.50 +0.3
804,287 + H281DRAFT_00715 0.68 -1.0
804,288 - H281DRAFT_00715 0.68 -0.7
804,830 + -2.9
805,078 + H281DRAFT_00716 0.17 -2.4
805,078 + H281DRAFT_00716 0.17 -0.1
805,137 + H281DRAFT_00716 0.21 +1.6
805,247 - H281DRAFT_00716 0.30 -0.2

Or see this region's nucleotide sequence