Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00133 and H281DRAFT_00134 overlap by 4 nucleotides H281DRAFT_00134 and H281DRAFT_00136 are separated by 590 nucleotides H281DRAFT_00136 and H281DRAFT_00137 are separated by 27 nucleotides
H281DRAFT_00133: H281DRAFT_00133 - cell division protein ZapA, at 139,749 to 140,063
_00133
H281DRAFT_00134: H281DRAFT_00134 - hypothetical protein, at 140,060 to 140,416
_00134
H281DRAFT_00136: H281DRAFT_00136 - vitamin B12 transporter, at 141,007 to 142,932
_00136
H281DRAFT_00137: H281DRAFT_00137 - iron complex transport system permease protein, at 142,960 to 144,018
_00137
Position (kb) 141
142
143 Strain fitness (log2 ratio) -2
-1
0
1
2 at 140.020 kb on + strand, within H281DRAFT_00133 at 140.431 kb on - strand at 140.506 kb on + strand at 140.507 kb on - strand at 140.507 kb on - strand at 140.540 kb on - strand at 140.570 kb on - strand at 140.749 kb on - strand at 141.133 kb on - strand at 141.143 kb on + strand at 141.144 kb on - strand at 141.489 kb on - strand, within H281DRAFT_00136 at 141.514 kb on + strand, within H281DRAFT_00136 at 141.515 kb on - strand, within H281DRAFT_00136 at 141.515 kb on - strand, within H281DRAFT_00136 at 141.515 kb on - strand, within H281DRAFT_00136 at 141.610 kb on + strand, within H281DRAFT_00136 at 141.654 kb on + strand, within H281DRAFT_00136 at 141.798 kb on + strand at 141.799 kb on - strand at 141.859 kb on + strand, within H281DRAFT_00136 at 141.901 kb on + strand, within H281DRAFT_00136 at 141.901 kb on + strand, within H281DRAFT_00136 at 141.945 kb on - strand, within H281DRAFT_00136 at 142.018 kb on + strand, within H281DRAFT_00136 at 142.052 kb on - strand, within H281DRAFT_00136 at 142.186 kb on - strand, within H281DRAFT_00136 at 142.186 kb on - strand, within H281DRAFT_00136 at 142.212 kb on - strand, within H281DRAFT_00136 at 142.218 kb on + strand, within H281DRAFT_00136 at 142.219 kb on - strand, within H281DRAFT_00136 at 142.219 kb on - strand, within H281DRAFT_00136 at 142.318 kb on + strand, within H281DRAFT_00136 at 142.319 kb on - strand, within H281DRAFT_00136 at 142.358 kb on - strand, within H281DRAFT_00136 at 142.358 kb on - strand, within H281DRAFT_00136 at 142.358 kb on - strand, within H281DRAFT_00136 at 142.360 kb on + strand, within H281DRAFT_00136 at 142.495 kb on + strand, within H281DRAFT_00136 at 142.519 kb on + strand, within H281DRAFT_00136 at 142.519 kb on + strand, within H281DRAFT_00136 at 142.520 kb on - strand, within H281DRAFT_00136 at 142.584 kb on - strand, within H281DRAFT_00136 at 142.822 kb on + strand at 142.822 kb on + strand at 142.823 kb on - strand at 142.880 kb on - strand at 142.903 kb on + strand at 142.904 kb on - strand at 142.904 kb on - strand at 143.293 kb on + strand, within H281DRAFT_00137 at 143.293 kb on + strand, within H281DRAFT_00137 at 143.294 kb on - strand, within H281DRAFT_00137 at 143.294 kb on - strand, within H281DRAFT_00137 at 143.297 kb on + strand, within H281DRAFT_00137 at 143.298 kb on - strand, within H281DRAFT_00137 at 143.300 kb on + strand, within H281DRAFT_00137 at 143.743 kb on + strand, within H281DRAFT_00137 at 143.823 kb on + strand, within H281DRAFT_00137 at 143.823 kb on + strand at 143.856 kb on + strand, within H281DRAFT_00137 at 143.856 kb on + strand, within H281DRAFT_00137 at 143.856 kb on + strand, within H281DRAFT_00137 at 143.856 kb on + strand, within H281DRAFT_00137 at 143.856 kb on + strand, within H281DRAFT_00137 at 143.857 kb on - strand, within H281DRAFT_00137 at 143.898 kb on - strand, within H281DRAFT_00137
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 140,020 + H281DRAFT_00133 0.86 -0.6 140,431 - +0.3 140,506 + +0.7 140,507 - +0.3 140,507 - -0.5 140,540 - -0.7 140,570 - -0.1 140,749 - -0.6 141,133 - -0.7 141,143 + +0.1 141,144 - -0.0 141,489 - H281DRAFT_00136 0.25 +0.4 141,514 + H281DRAFT_00136 0.26 -1.4 141,515 - H281DRAFT_00136 0.26 -1.3 141,515 - H281DRAFT_00136 0.26 -0.4 141,515 - H281DRAFT_00136 0.26 +0.7 141,610 + H281DRAFT_00136 0.31 +1.2 141,654 + H281DRAFT_00136 0.34 -0.5 141,798 + +2.6 141,799 - -1.0 141,859 + H281DRAFT_00136 0.44 +0.2 141,901 + H281DRAFT_00136 0.46 -0.3 141,901 + H281DRAFT_00136 0.46 -2.0 141,945 - H281DRAFT_00136 0.49 -0.5 142,018 + H281DRAFT_00136 0.52 +0.4 142,052 - H281DRAFT_00136 0.54 +0.2 142,186 - H281DRAFT_00136 0.61 -0.0 142,186 - H281DRAFT_00136 0.61 -0.0 142,212 - H281DRAFT_00136 0.63 -0.2 142,218 + H281DRAFT_00136 0.63 -0.3 142,219 - H281DRAFT_00136 0.63 -0.1 142,219 - H281DRAFT_00136 0.63 +0.4 142,318 + H281DRAFT_00136 0.68 -1.0 142,319 - H281DRAFT_00136 0.68 -0.6 142,358 - H281DRAFT_00136 0.70 -0.6 142,358 - H281DRAFT_00136 0.70 -0.3 142,358 - H281DRAFT_00136 0.70 -0.4 142,360 + H281DRAFT_00136 0.70 -1.9 142,495 + H281DRAFT_00136 0.77 -1.2 142,519 + H281DRAFT_00136 0.79 -0.5 142,519 + H281DRAFT_00136 0.79 +0.6 142,520 - H281DRAFT_00136 0.79 -0.3 142,584 - H281DRAFT_00136 0.82 -0.4 142,822 + -0.0 142,822 + -0.0 142,823 - -0.8 142,880 - -1.7 142,903 + +0.3 142,904 - -1.9 142,904 - -0.8 143,293 + H281DRAFT_00137 0.31 +0.0 143,293 + H281DRAFT_00137 0.31 +0.7 143,294 - H281DRAFT_00137 0.32 -0.9 143,294 - H281DRAFT_00137 0.32 +0.4 143,297 + H281DRAFT_00137 0.32 -1.0 143,298 - H281DRAFT_00137 0.32 -0.6 143,300 + H281DRAFT_00137 0.32 +1.0 143,743 + H281DRAFT_00137 0.74 -0.2 143,823 + H281DRAFT_00137 0.81 +0.7 143,823 + -0.4 143,856 + H281DRAFT_00137 0.85 -0.3 143,856 + H281DRAFT_00137 0.85 +0.5 143,856 + H281DRAFT_00137 0.85 -0.2 143,856 + H281DRAFT_00137 0.85 -0.2 143,856 + H281DRAFT_00137 0.85 -0.5 143,857 - H281DRAFT_00137 0.85 +0.6 143,898 - H281DRAFT_00137 0.89 -0.5
Or see this region's nucleotide sequence