Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_00001

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_00001 and H281DRAFT_00002 are separated by 367 nucleotides H281DRAFT_00001: H281DRAFT_00001 - Transposase DDE domain-containing protein, at 1 to 705 _00001 H281DRAFT_00002: H281DRAFT_00002 - hypothetical protein, at 1,073 to 1,918 _00002 Position (kb) 0 1Strain fitness (log2 ratio) -1 0 1at 0.829 kb on + strandat 1.033 kb on + strandat 1.033 kb on + strandat 1.034 kb on - strandat 1.034 kb on - strandat 1.069 kb on - strandat 1.080 kb on + strandat 1.122 kb on + strandat 1.122 kb on + strandat 1.123 kb on - strandat 1.123 kb on - strandat 1.123 kb on - strandat 1.123 kb on - strandat 1.599 kb on - strand, within H281DRAFT_00002at 1.681 kb on - strand, within H281DRAFT_00002

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C)
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829 + +0.1
1,033 + +0.4
1,033 + -0.8
1,034 - -0.4
1,034 - -0.6
1,069 - -1.0
1,080 + +0.3
1,122 + -0.4
1,122 + +1.1
1,123 - +0.1
1,123 - -0.1
1,123 - +0.2
1,123 - +0.1
1,599 - H281DRAFT_00002 0.62 -0.2
1,681 - H281DRAFT_00002 0.72 -0.3

Or see this region's nucleotide sequence