Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3510 and Dsui_3511 are separated by 93 nucleotides Dsui_3511 and Dsui_3512 are separated by 215 nucleotides Dsui_3512 and Dsui_3513 are separated by 16 nucleotides
Dsui_3510: Dsui_3510 - 1-deoxy-D-xylulose-5-phosphate synthase, at 3,774,449 to 3,776,305
_3510
Dsui_3511: Dsui_3511 - hypothetical protein, at 3,776,399 to 3,777,196
_3511
Dsui_3512: Dsui_3512 - ribosomal protein L19, at 3,777,412 to 3,777,783
_3512
Dsui_3513: Dsui_3513 - tRNA (guanine-N1)-methyltransferase, at 3,777,800 to 3,778,609
_3513
Position (kb)
3776
3777
3778 Strain fitness (log2 ratio)
-2
-1
0
1 at 3776.351 kb on - strand at 3776.351 kb on - strand at 3776.429 kb on + strand at 3776.544 kb on + strand, within Dsui_3511 at 3776.574 kb on + strand, within Dsui_3511 at 3776.665 kb on - strand, within Dsui_3511 at 3776.855 kb on - strand, within Dsui_3511 at 3776.886 kb on + strand, within Dsui_3511 at 3776.923 kb on + strand, within Dsui_3511 at 3776.923 kb on + strand, within Dsui_3511 at 3776.935 kb on + strand, within Dsui_3511 at 3776.977 kb on - strand, within Dsui_3511 at 3776.979 kb on + strand, within Dsui_3511 at 3776.979 kb on + strand, within Dsui_3511 at 3776.979 kb on + strand, within Dsui_3511 at 3776.987 kb on - strand, within Dsui_3511 at 3776.998 kb on + strand, within Dsui_3511 at 3777.146 kb on + strand at 3777.154 kb on - strand at 3777.155 kb on + strand at 3777.155 kb on + strand at 3777.189 kb on - strand at 3777.189 kb on - strand at 3777.207 kb on - strand at 3777.332 kb on + strand at 3777.410 kb on + strand at 3777.410 kb on + strand at 3777.418 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 3,776,351 - +0.1 3,776,351 - +0.1 3,776,429 + -1.6 3,776,544 + Dsui_3511 0.18 -0.1 3,776,574 + Dsui_3511 0.22 +0.3 3,776,665 - Dsui_3511 0.33 +0.0 3,776,855 - Dsui_3511 0.57 -2.4 3,776,886 + Dsui_3511 0.61 +0.5 3,776,923 + Dsui_3511 0.66 -0.4 3,776,923 + Dsui_3511 0.66 -0.3 3,776,935 + Dsui_3511 0.67 -0.5 3,776,977 - Dsui_3511 0.72 -0.0 3,776,979 + Dsui_3511 0.73 -0.0 3,776,979 + Dsui_3511 0.73 -0.5 3,776,979 + Dsui_3511 0.73 +0.2 3,776,987 - Dsui_3511 0.74 -0.4 3,776,998 + Dsui_3511 0.75 -0.0 3,777,146 + -0.3 3,777,154 - -0.2 3,777,155 + -0.5 3,777,155 + -0.6 3,777,189 - +0.9 3,777,189 - +0.2 3,777,207 - +1.6 3,777,332 + +1.1 3,777,410 + +0.7 3,777,410 + +0.4 3,777,418 - +0.7
Or see this region's nucleotide sequence