Strain Fitness in Dechlorosoma suillum PS around Dsui_3511

Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_3510 and Dsui_3511 are separated by 93 nucleotidesDsui_3511 and Dsui_3512 are separated by 215 nucleotidesDsui_3512 and Dsui_3513 are separated by 16 nucleotides Dsui_3510: Dsui_3510 - 1-deoxy-D-xylulose-5-phosphate synthase, at 3,774,449 to 3,776,305 _3510 Dsui_3511: Dsui_3511 - hypothetical protein, at 3,776,399 to 3,777,196 _3511 Dsui_3512: Dsui_3512 - ribosomal protein L19, at 3,777,412 to 3,777,783 _3512 Dsui_3513: Dsui_3513 - tRNA (guanine-N1)-methyltransferase, at 3,777,800 to 3,778,609 _3513 Position (kb) 3776 3777 3778Strain fitness (log2 ratio) -2 -1 0 1at 3776.351 kb on - strandat 3776.351 kb on - strandat 3776.429 kb on + strandat 3776.544 kb on + strand, within Dsui_3511at 3776.574 kb on + strand, within Dsui_3511at 3776.665 kb on - strand, within Dsui_3511at 3776.855 kb on - strand, within Dsui_3511at 3776.886 kb on + strand, within Dsui_3511at 3776.923 kb on + strand, within Dsui_3511at 3776.923 kb on + strand, within Dsui_3511at 3776.935 kb on + strand, within Dsui_3511at 3776.977 kb on - strand, within Dsui_3511at 3776.979 kb on + strand, within Dsui_3511at 3776.979 kb on + strand, within Dsui_3511at 3776.979 kb on + strand, within Dsui_3511at 3776.987 kb on - strand, within Dsui_3511at 3776.998 kb on + strand, within Dsui_3511at 3777.146 kb on + strandat 3777.154 kb on - strandat 3777.155 kb on + strandat 3777.155 kb on + strandat 3777.189 kb on - strandat 3777.189 kb on - strandat 3777.207 kb on - strandat 3777.332 kb on + strandat 3777.410 kb on + strandat 3777.410 kb on + strandat 3777.418 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate
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3,776,351 - +0.1
3,776,351 - +0.1
3,776,429 + -1.6
3,776,544 + Dsui_3511 0.18 -0.1
3,776,574 + Dsui_3511 0.22 +0.3
3,776,665 - Dsui_3511 0.33 +0.0
3,776,855 - Dsui_3511 0.57 -2.4
3,776,886 + Dsui_3511 0.61 +0.5
3,776,923 + Dsui_3511 0.66 -0.4
3,776,923 + Dsui_3511 0.66 -0.3
3,776,935 + Dsui_3511 0.67 -0.5
3,776,977 - Dsui_3511 0.72 -0.0
3,776,979 + Dsui_3511 0.73 -0.0
3,776,979 + Dsui_3511 0.73 -0.5
3,776,979 + Dsui_3511 0.73 +0.2
3,776,987 - Dsui_3511 0.74 -0.4
3,776,998 + Dsui_3511 0.75 -0.0
3,777,146 + -0.3
3,777,154 - -0.2
3,777,155 + -0.5
3,777,155 + -0.6
3,777,189 - +0.9
3,777,189 - +0.2
3,777,207 - +1.6
3,777,332 + +1.1
3,777,410 + +0.7
3,777,410 + +0.4
3,777,418 - +0.7

Or see this region's nucleotide sequence