Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3379 and Dsui_3380 overlap by 11 nucleotides Dsui_3380 and Dsui_3381 are separated by 79 nucleotides Dsui_3381 and Dsui_3382 are separated by 382 nucleotides
Dsui_3379: Dsui_3379 - S-methyl-5-thioribose-1-phosphate isomerase, at 3,621,488 to 3,622,579
_3379
Dsui_3380: Dsui_3380 - ribulose-5-phosphate 4-epimerase-like epimerase or aldolase, at 3,622,569 to 3,623,219
_3380
Dsui_3381: Dsui_3381 - hypothetical protein, at 3,623,299 to 3,623,874
_3381
Dsui_3382: Dsui_3382 - universal stress protein UspA-like protein, at 3,624,257 to 3,625,168
_3382
Position (kb)
3623
3624 Strain fitness (log2 ratio)
-1
0
1
2 at 3622.368 kb on - strand at 3622.559 kb on + strand at 3622.618 kb on - strand at 3622.721 kb on - strand, within Dsui_3380 at 3622.781 kb on + strand, within Dsui_3380 at 3622.825 kb on - strand at 3622.962 kb on - strand, within Dsui_3380 at 3622.985 kb on - strand, within Dsui_3380 at 3622.985 kb on - strand at 3622.986 kb on - strand, within Dsui_3380 at 3623.026 kb on - strand, within Dsui_3380 at 3623.027 kb on - strand, within Dsui_3380 at 3623.027 kb on - strand, within Dsui_3380 at 3623.039 kb on - strand, within Dsui_3380 at 3623.062 kb on + strand at 3623.128 kb on - strand, within Dsui_3380 at 3623.169 kb on - strand at 3623.174 kb on - strand at 3623.183 kb on - strand at 3623.184 kb on - strand at 3623.213 kb on + strand at 3623.282 kb on - strand at 3623.333 kb on - strand at 3623.371 kb on - strand, within Dsui_3381 at 3623.423 kb on - strand, within Dsui_3381 at 3623.460 kb on - strand, within Dsui_3381 at 3623.479 kb on + strand, within Dsui_3381 at 3623.590 kb on - strand, within Dsui_3381 at 3623.618 kb on - strand, within Dsui_3381 at 3623.635 kb on - strand, within Dsui_3381 at 3623.642 kb on + strand at 3623.706 kb on + strand at 3623.706 kb on + strand at 3623.714 kb on - strand, within Dsui_3381 at 3623.728 kb on + strand, within Dsui_3381 at 3623.741 kb on - strand, within Dsui_3381 at 3623.760 kb on - strand, within Dsui_3381 at 3623.887 kb on + strand at 3623.887 kb on + strand at 3623.887 kb on + strand at 3623.895 kb on - strand at 3624.018 kb on + strand at 3624.062 kb on + strand at 3624.062 kb on + strand at 3624.070 kb on - strand at 3624.070 kb on - strand at 3624.072 kb on - strand at 3624.270 kb on + strand at 3624.324 kb on - strand at 3624.365 kb on - strand, within Dsui_3382 at 3624.393 kb on - strand, within Dsui_3382 at 3624.518 kb on + strand, within Dsui_3382 at 3624.597 kb on + strand, within Dsui_3382 at 3624.603 kb on - strand, within Dsui_3382 at 3624.755 kb on + strand at 3624.762 kb on + strand at 3624.772 kb on + strand at 3624.787 kb on + strand, within Dsui_3382
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 3,622,368 - -0.8 3,622,559 + +0.8 3,622,618 - +0.4 3,622,721 - Dsui_3380 0.23 +0.4 3,622,781 + Dsui_3380 0.33 +0.0 3,622,825 - +0.1 3,622,962 - Dsui_3380 0.60 -0.0 3,622,985 - Dsui_3380 0.64 +0.5 3,622,985 - -1.5 3,622,986 - Dsui_3380 0.64 +0.6 3,623,026 - Dsui_3380 0.70 -0.2 3,623,027 - Dsui_3380 0.70 +0.6 3,623,027 - Dsui_3380 0.70 -0.0 3,623,039 - Dsui_3380 0.72 -0.1 3,623,062 + +1.8 3,623,128 - Dsui_3380 0.86 +0.1 3,623,169 - -0.6 3,623,174 - +1.8 3,623,183 - +1.2 3,623,184 - +1.3 3,623,213 + +0.2 3,623,282 - +0.5 3,623,333 - -0.7 3,623,371 - Dsui_3381 0.12 +1.3 3,623,423 - Dsui_3381 0.22 +1.1 3,623,460 - Dsui_3381 0.28 +1.7 3,623,479 + Dsui_3381 0.31 +0.8 3,623,590 - Dsui_3381 0.51 +1.0 3,623,618 - Dsui_3381 0.55 +0.3 3,623,635 - Dsui_3381 0.58 +1.0 3,623,642 + -1.3 3,623,706 + +1.1 3,623,706 + +0.5 3,623,714 - Dsui_3381 0.72 +0.3 3,623,728 + Dsui_3381 0.74 -0.1 3,623,741 - Dsui_3381 0.77 +0.8 3,623,760 - Dsui_3381 0.80 +1.4 3,623,887 + -1.2 3,623,887 + +1.0 3,623,887 + +0.1 3,623,895 - +0.3 3,624,018 + -0.6 3,624,062 + +0.6 3,624,062 + +0.1 3,624,070 - +0.7 3,624,070 - +1.0 3,624,072 - +1.4 3,624,270 + -0.1 3,624,324 - +0.9 3,624,365 - Dsui_3382 0.12 +0.6 3,624,393 - Dsui_3382 0.15 +1.2 3,624,518 + Dsui_3382 0.29 -0.8 3,624,597 + Dsui_3382 0.37 +0.4 3,624,603 - Dsui_3382 0.38 +0.6 3,624,755 + -0.1 3,624,762 + -0.3 3,624,772 + -1.4 3,624,787 + Dsui_3382 0.58 -0.6
Or see this region's nucleotide sequence