Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3322 and Dsui_3323 are separated by 137 nucleotides Dsui_3323 and Dsui_3324 are separated by 92 nucleotides Dsui_3324 and Dsui_3325 are separated by 61 nucleotides
Dsui_3322: Dsui_3322 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase, at 3,561,786 to 3,562,823
_3322
Dsui_3323: Dsui_3323 - tRNA-guanine transglycosylase, queuosine-34-forming, at 3,562,961 to 3,564,085
_3323
Dsui_3324: Dsui_3324 - preprotein translocase, YajC subunit, at 3,564,178 to 3,564,507
_3324
Dsui_3325: Dsui_3325 - protein-export membrane protein, SecD/SecF family, at 3,564,569 to 3,566,437
_3325
Position (kb)
3562
3563
3564
3565 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3562.016 kb on + strand, within Dsui_3322 at 3562.120 kb on + strand, within Dsui_3322 at 3562.260 kb on + strand, within Dsui_3322 at 3562.281 kb on + strand, within Dsui_3322 at 3562.419 kb on - strand at 3562.546 kb on - strand at 3562.558 kb on + strand, within Dsui_3322 at 3562.558 kb on + strand, within Dsui_3322 at 3562.684 kb on + strand at 3562.684 kb on + strand at 3562.684 kb on + strand, within Dsui_3322 at 3562.692 kb on - strand at 3562.695 kb on - strand at 3562.740 kb on + strand at 3562.740 kb on + strand at 3562.784 kb on + strand at 3562.824 kb on - strand at 3562.847 kb on + strand at 3562.847 kb on + strand at 3562.855 kb on - strand at 3562.877 kb on + strand at 3562.885 kb on - strand at 3562.888 kb on + strand at 3562.956 kb on + strand at 3562.956 kb on + strand at 3562.956 kb on + strand at 3562.956 kb on + strand at 3562.975 kb on + strand at 3563.030 kb on + strand at 3563.061 kb on + strand at 3563.061 kb on + strand at 3563.069 kb on - strand at 3563.111 kb on + strand, within Dsui_3323 at 3563.206 kb on + strand, within Dsui_3323 at 3563.263 kb on + strand, within Dsui_3323 at 3563.282 kb on + strand, within Dsui_3323 at 3563.633 kb on + strand, within Dsui_3323 at 3563.788 kb on + strand at 3563.789 kb on + strand, within Dsui_3323 at 3563.904 kb on - strand, within Dsui_3323 at 3563.905 kb on + strand, within Dsui_3323 at 3563.970 kb on + strand, within Dsui_3323 at 3563.970 kb on + strand, within Dsui_3323 at 3564.080 kb on + strand at 3564.080 kb on + strand at 3564.274 kb on + strand, within Dsui_3324 at 3564.475 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 3,562,016 + Dsui_3322 0.22 -0.1 3,562,120 + Dsui_3322 0.32 -1.3 3,562,260 + Dsui_3322 0.46 +0.5 3,562,281 + Dsui_3322 0.48 -0.0 3,562,419 - -3.9 3,562,546 - -0.0 3,562,558 + Dsui_3322 0.74 +0.0 3,562,558 + Dsui_3322 0.74 -0.3 3,562,684 + +0.6 3,562,684 + -2.9 3,562,684 + Dsui_3322 0.87 +0.9 3,562,692 - +2.0 3,562,695 - -0.7 3,562,740 + -0.2 3,562,740 + +0.5 3,562,784 + +0.2 3,562,824 - +0.1 3,562,847 + +0.9 3,562,847 + +1.0 3,562,855 - -2.4 3,562,877 + +0.6 3,562,885 - -0.9 3,562,888 + +0.8 3,562,956 + +1.0 3,562,956 + +0.8 3,562,956 + +0.1 3,562,956 + +1.0 3,562,975 + -1.3 3,563,030 + -0.6 3,563,061 + -0.6 3,563,061 + -3.1 3,563,069 - -2.4 3,563,111 + Dsui_3323 0.13 -0.5 3,563,206 + Dsui_3323 0.22 -1.0 3,563,263 + Dsui_3323 0.27 -1.1 3,563,282 + Dsui_3323 0.29 -1.8 3,563,633 + Dsui_3323 0.60 -0.5 3,563,788 + +0.9 3,563,789 + Dsui_3323 0.74 -0.9 3,563,904 - Dsui_3323 0.84 -1.5 3,563,905 + Dsui_3323 0.84 -0.2 3,563,970 + Dsui_3323 0.90 -4.2 3,563,970 + Dsui_3323 0.90 -0.3 3,564,080 + +0.9 3,564,080 + +1.1 3,564,274 + Dsui_3324 0.29 -3.1 3,564,475 + -2.1
Or see this region's nucleotide sequence