Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3239 and Dsui_3240 are separated by 27 nucleotides Dsui_3240 and Dsui_3241 are separated by 168 nucleotides Dsui_3241 and Dsui_3242 overlap by 17 nucleotides
Dsui_3239: Dsui_3239 - acetyl-CoA acetyltransferase, at 3,482,891 to 3,484,069
_3239
Dsui_3240: Dsui_3240 - cobalamin biosynthesis protein cobD/CbiB, at 3,484,097 to 3,485,017
_3240
Dsui_3241: Dsui_3241 - NTP pyrophosphohydrolase, at 3,485,186 to 3,485,812
_3241
Dsui_3242: Dsui_3242 - hypothetical protein, at 3,485,796 to 3,486,056
_3242
Position (kb)
3484
3485
3486 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3483.104 kb on - strand, within Dsui_3239 at 3483.126 kb on + strand, within Dsui_3239 at 3483.159 kb on - strand, within Dsui_3239 at 3483.170 kb on - strand, within Dsui_3239 at 3483.242 kb on - strand, within Dsui_3239 at 3483.515 kb on + strand, within Dsui_3239 at 3483.539 kb on + strand, within Dsui_3239 at 3483.549 kb on + strand, within Dsui_3239 at 3483.559 kb on + strand, within Dsui_3239 at 3483.559 kb on + strand, within Dsui_3239 at 3483.623 kb on - strand, within Dsui_3239 at 3483.661 kb on - strand, within Dsui_3239 at 3483.680 kb on - strand, within Dsui_3239 at 3483.783 kb on - strand, within Dsui_3239 at 3483.865 kb on - strand, within Dsui_3239 at 3483.920 kb on + strand, within Dsui_3239 at 3483.935 kb on - strand, within Dsui_3239 at 3484.100 kb on + strand at 3484.245 kb on + strand, within Dsui_3240 at 3484.298 kb on - strand, within Dsui_3240 at 3484.389 kb on - strand, within Dsui_3240 at 3484.460 kb on + strand, within Dsui_3240 at 3484.520 kb on - strand, within Dsui_3240 at 3484.525 kb on - strand, within Dsui_3240 at 3484.525 kb on - strand, within Dsui_3240 at 3484.760 kb on - strand, within Dsui_3240 at 3484.809 kb on + strand, within Dsui_3240 at 3484.942 kb on - strand at 3484.976 kb on - strand at 3484.976 kb on - strand at 3485.118 kb on + strand at 3485.168 kb on - strand at 3485.206 kb on + strand at 3485.276 kb on - strand, within Dsui_3241 at 3485.276 kb on - strand, within Dsui_3241 at 3485.276 kb on - strand, within Dsui_3241 at 3485.276 kb on - strand, within Dsui_3241 at 3485.351 kb on + strand, within Dsui_3241 at 3485.359 kb on - strand, within Dsui_3241 at 3485.397 kb on - strand, within Dsui_3241 at 3485.401 kb on + strand, within Dsui_3241 at 3485.428 kb on + strand, within Dsui_3241 at 3485.502 kb on - strand, within Dsui_3241 at 3485.578 kb on + strand, within Dsui_3241 at 3485.611 kb on + strand at 3485.619 kb on - strand, within Dsui_3241 at 3485.619 kb on - strand, within Dsui_3241 at 3485.619 kb on - strand, within Dsui_3241 at 3485.643 kb on + strand, within Dsui_3241 at 3485.776 kb on + strand at 3485.840 kb on + strand, within Dsui_3242 at 3485.998 kb on + strand, within Dsui_3242 at 3485.998 kb on + strand, within Dsui_3242 at 3485.998 kb on + strand, within Dsui_3242 at 3485.998 kb on + strand, within Dsui_3242 at 3486.006 kb on - strand, within Dsui_3242 at 3486.006 kb on - strand, within Dsui_3242 at 3486.008 kb on + strand, within Dsui_3242
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 3,483,104 - Dsui_3239 0.18 -1.0 3,483,126 + Dsui_3239 0.20 -1.4 3,483,159 - Dsui_3239 0.23 -1.1 3,483,170 - Dsui_3239 0.24 -0.8 3,483,242 - Dsui_3239 0.30 -1.1 3,483,515 + Dsui_3239 0.53 -1.6 3,483,539 + Dsui_3239 0.55 -0.4 3,483,549 + Dsui_3239 0.56 +0.2 3,483,559 + Dsui_3239 0.57 -0.3 3,483,559 + Dsui_3239 0.57 -1.3 3,483,623 - Dsui_3239 0.62 -0.7 3,483,661 - Dsui_3239 0.65 -0.1 3,483,680 - Dsui_3239 0.67 +0.1 3,483,783 - Dsui_3239 0.76 -0.4 3,483,865 - Dsui_3239 0.83 -0.7 3,483,920 + Dsui_3239 0.87 -4.5 3,483,935 - Dsui_3239 0.89 -1.5 3,484,100 + -1.5 3,484,245 + Dsui_3240 0.16 -2.2 3,484,298 - Dsui_3240 0.22 -2.0 3,484,389 - Dsui_3240 0.32 -0.9 3,484,460 + Dsui_3240 0.39 -2.0 3,484,520 - Dsui_3240 0.46 -2.4 3,484,525 - Dsui_3240 0.46 -3.2 3,484,525 - Dsui_3240 0.46 -4.2 3,484,760 - Dsui_3240 0.72 -2.8 3,484,809 + Dsui_3240 0.77 -0.4 3,484,942 - -2.3 3,484,976 - +0.1 3,484,976 - -1.6 3,485,118 + -3.5 3,485,168 - +0.7 3,485,206 + -0.2 3,485,276 - Dsui_3241 0.14 +0.6 3,485,276 - Dsui_3241 0.14 +0.9 3,485,276 - Dsui_3241 0.14 +0.7 3,485,276 - Dsui_3241 0.14 +1.3 3,485,351 + Dsui_3241 0.26 -2.6 3,485,359 - Dsui_3241 0.28 +0.4 3,485,397 - Dsui_3241 0.34 +0.8 3,485,401 + Dsui_3241 0.34 -0.4 3,485,428 + Dsui_3241 0.39 -0.5 3,485,502 - Dsui_3241 0.50 +0.3 3,485,578 + Dsui_3241 0.63 +0.8 3,485,611 + -1.0 3,485,619 - Dsui_3241 0.69 +2.2 3,485,619 - Dsui_3241 0.69 +1.3 3,485,619 - Dsui_3241 0.69 +0.6 3,485,643 + Dsui_3241 0.73 -0.4 3,485,776 + -1.1 3,485,840 + Dsui_3242 0.17 -3.4 3,485,998 + Dsui_3242 0.77 -1.7 3,485,998 + Dsui_3242 0.77 -0.9 3,485,998 + Dsui_3242 0.77 -1.5 3,485,998 + Dsui_3242 0.77 -0.6 3,486,006 - Dsui_3242 0.80 +0.9 3,486,006 - Dsui_3242 0.80 +0.9 3,486,008 + Dsui_3242 0.81 -1.2
Or see this region's nucleotide sequence