Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3218 and Dsui_3219 are separated by 113 nucleotides Dsui_3219 and Dsui_3220 are separated by 102 nucleotides Dsui_3220 and Dsui_3221 are separated by 110 nucleotides Dsui_3221 and Dsui_3222 are separated by 39 nucleotides
Dsui_3218: Dsui_3218 - transcription termination factor Rho, at 3,456,586 to 3,457,848
_3218
Dsui_3219: Dsui_3219 - ribosomal protein L31, at 3,457,962 to 3,458,177
_3219
Dsui_3220: Dsui_3220 - PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase, at 3,458,280 to 3,459,923
_3220
Dsui_3221: Dsui_3221 - cytochrome c553, at 3,460,034 to 3,460,720
_3221
Dsui_3222: Dsui_3222 - oligoribonuclease (3'->5' exoribonuclease), at 3,460,760 to 3,461,305
_3222
Position (kb)
3458
3459
3460 Strain fitness (log2 ratio)
-2
-1
0
1 at 3458.266 kb on - strand at 3458.938 kb on + strand, within Dsui_3220 at 3458.991 kb on + strand, within Dsui_3220 at 3459.380 kb on + strand, within Dsui_3220 at 3459.504 kb on + strand, within Dsui_3220 at 3459.916 kb on - strand at 3459.974 kb on + strand at 3459.985 kb on + strand at 3460.030 kb on - strand at 3460.032 kb on + strand at 3460.040 kb on - strand at 3460.040 kb on - strand at 3460.113 kb on - strand, within Dsui_3221 at 3460.302 kb on + strand, within Dsui_3221 at 3460.302 kb on + strand, within Dsui_3221 at 3460.314 kb on + strand, within Dsui_3221 at 3460.356 kb on + strand at 3460.401 kb on - strand, within Dsui_3221 at 3460.444 kb on - strand, within Dsui_3221 at 3460.498 kb on - strand, within Dsui_3221 at 3460.660 kb on + strand at 3460.673 kb on + strand at 3460.673 kb on + strand at 3460.680 kb on + strand at 3460.688 kb on - strand at 3460.722 kb on + strand at 3460.726 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 3,458,266 - +0.1 3,458,938 + Dsui_3220 0.40 -0.8 3,458,991 + Dsui_3220 0.43 -2.3 3,459,380 + Dsui_3220 0.67 -2.3 3,459,504 + Dsui_3220 0.74 -1.2 3,459,916 - +0.1 3,459,974 + -0.5 3,459,985 + +0.8 3,460,030 - +1.5 3,460,032 + -0.1 3,460,040 - +0.5 3,460,040 - +0.5 3,460,113 - Dsui_3221 0.11 -0.2 3,460,302 + Dsui_3221 0.39 +0.3 3,460,302 + Dsui_3221 0.39 -1.7 3,460,314 + Dsui_3221 0.41 -0.3 3,460,356 + -0.9 3,460,401 - Dsui_3221 0.53 +0.1 3,460,444 - Dsui_3221 0.60 +0.5 3,460,498 - Dsui_3221 0.68 -0.1 3,460,660 + -1.0 3,460,673 + -0.6 3,460,673 + -1.5 3,460,680 + -1.3 3,460,688 - +0.4 3,460,722 + -0.9 3,460,726 + -0.9
Or see this region's nucleotide sequence