Strain Fitness in Dechlorosoma suillum PS around Dsui_3208

Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_3206 and Dsui_3207 overlap by 7 nucleotidesDsui_3207 and Dsui_3208 are separated by 262 nucleotidesDsui_3208 and Dsui_3209 are separated by 68 nucleotidesDsui_3209 and Dsui_3210 are separated by 10 nucleotides Dsui_3206: Dsui_3206 - putative metal-binding protein, at 3,441,816 to 3,442,232 _3206 Dsui_3207: Dsui_3207 - ankyrin repeat-containing protein, at 3,442,226 to 3,442,738 _3207 Dsui_3208: Dsui_3208 - cysteine synthase A, at 3,443,001 to 3,443,933 _3208 Dsui_3209: Dsui_3209 - putative esterase of the alpha/beta hydrolase fold protein, at 3,444,002 to 3,444,538 _3209 Dsui_3210: Dsui_3210 - hypothetical protein, at 3,444,549 to 3,445,031 _3210 Position (kb) 3443 3444Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1 2at 3442.073 kb on + strand, within Dsui_3206at 3442.081 kb on - strand, within Dsui_3206at 3442.083 kb on - strand, within Dsui_3206at 3442.089 kb on - strand, within Dsui_3206at 3442.159 kb on + strandat 3442.167 kb on - strand, within Dsui_3206at 3442.484 kb on - strand, within Dsui_3207at 3442.513 kb on + strandat 3442.522 kb on - strand, within Dsui_3207at 3442.613 kb on + strandat 3442.621 kb on - strand, within Dsui_3207at 3442.695 kb on + strandat 3442.728 kb on + strandat 3442.736 kb on - strandat 3442.793 kb on + strandat 3442.828 kb on + strandat 3442.831 kb on - strandat 3442.836 kb on - strandat 3442.836 kb on - strandat 3442.836 kb on - strandat 3442.836 kb on - strandat 3442.844 kb on - strandat 3442.857 kb on + strandat 3442.918 kb on + strandat 3442.956 kb on + strandat 3443.015 kb on + strandat 3443.015 kb on + strandat 3443.016 kb on + strandat 3443.023 kb on - strandat 3443.024 kb on - strandat 3443.125 kb on + strand, within Dsui_3208at 3443.237 kb on + strand, within Dsui_3208at 3443.315 kb on + strand, within Dsui_3208at 3443.315 kb on + strand, within Dsui_3208at 3443.323 kb on - strand, within Dsui_3208at 3443.394 kb on - strandat 3443.424 kb on + strand, within Dsui_3208at 3443.468 kb on + strand, within Dsui_3208at 3443.486 kb on - strandat 3443.537 kb on + strand, within Dsui_3208at 3443.658 kb on + strand, within Dsui_3208at 3443.678 kb on - strand, within Dsui_3208at 3443.791 kb on - strandat 3443.810 kb on + strand, within Dsui_3208at 3443.869 kb on - strandat 3443.908 kb on - strandat 3443.951 kb on - strandat 3444.101 kb on - strandat 3444.138 kb on - strand, within Dsui_3209at 3444.138 kb on - strand, within Dsui_3209at 3444.148 kb on - strand, within Dsui_3209at 3444.161 kb on - strandat 3444.291 kb on - strand, within Dsui_3209at 3444.304 kb on - strand, within Dsui_3209at 3444.347 kb on + strand, within Dsui_3209at 3444.365 kb on - strandat 3444.433 kb on + strand, within Dsui_3209at 3444.469 kb on + strand, within Dsui_3209at 3444.477 kb on - strandat 3444.525 kb on + strandat 3444.654 kb on - strand, within Dsui_3210at 3444.717 kb on + strand, within Dsui_3210at 3444.773 kb on - strand, within Dsui_3210at 3444.836 kb on + strand, within Dsui_3210at 3444.894 kb on + strand, within Dsui_3210

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Per-strain Table

Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate
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3,442,073 + Dsui_3206 0.62 -3.2
3,442,081 - Dsui_3206 0.64 +0.8
3,442,083 - Dsui_3206 0.64 +0.2
3,442,089 - Dsui_3206 0.65 +0.5
3,442,159 + +0.1
3,442,167 - Dsui_3206 0.84 +0.8
3,442,484 - Dsui_3207 0.50 +0.6
3,442,513 + -2.0
3,442,522 - Dsui_3207 0.58 +0.2
3,442,613 + -2.5
3,442,621 - Dsui_3207 0.77 +0.4
3,442,695 + -0.7
3,442,728 + -3.9
3,442,736 - +1.4
3,442,793 + +0.1
3,442,828 + -0.7
3,442,831 - -0.7
3,442,836 - -1.0
3,442,836 - -0.2
3,442,836 - +0.3
3,442,836 - -0.4
3,442,844 - +0.8
3,442,857 + -3.6
3,442,918 + -4.2
3,442,956 + -2.1
3,443,015 + -6.0
3,443,015 + -5.2
3,443,016 + -5.9
3,443,023 - -0.7
3,443,024 - -3.1
3,443,125 + Dsui_3208 0.13 -5.4
3,443,237 + Dsui_3208 0.25 -6.2
3,443,315 + Dsui_3208 0.34 -5.0
3,443,315 + Dsui_3208 0.34 -5.6
3,443,323 - Dsui_3208 0.35 -4.2
3,443,394 - -2.2
3,443,424 + Dsui_3208 0.45 -5.4
3,443,468 + Dsui_3208 0.50 -6.5
3,443,486 - -3.6
3,443,537 + Dsui_3208 0.57 -6.6
3,443,658 + Dsui_3208 0.70 -5.9
3,443,678 - Dsui_3208 0.73 -3.3
3,443,791 - -3.7
3,443,810 + Dsui_3208 0.87 -5.0
3,443,869 - -4.6
3,443,908 - -1.1
3,443,951 - -2.4
3,444,101 - -0.6
3,444,138 - Dsui_3209 0.25 -4.9
3,444,138 - Dsui_3209 0.25 -0.1
3,444,148 - Dsui_3209 0.27 -0.4
3,444,161 - +1.2
3,444,291 - Dsui_3209 0.54 -0.7
3,444,304 - Dsui_3209 0.56 -1.3
3,444,347 + Dsui_3209 0.64 +1.8
3,444,365 - +0.8
3,444,433 + Dsui_3209 0.80 +0.6
3,444,469 + Dsui_3209 0.87 +0.9
3,444,477 - -1.5
3,444,525 + +1.2
3,444,654 - Dsui_3210 0.22 -0.1
3,444,717 + Dsui_3210 0.35 +0.5
3,444,773 - Dsui_3210 0.46 -0.6
3,444,836 + Dsui_3210 0.59 +0.3
3,444,894 + Dsui_3210 0.71 +0.7

Or see this region's nucleotide sequence