Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3179 and Dsui_3180 overlap by 1 nucleotides Dsui_3180 and Dsui_3181 are separated by 182 nucleotides Dsui_3181 and Dsui_3182 overlap by 4 nucleotides
Dsui_3179: Dsui_3179 - signal transduction histidine kinase, at 3,410,128 to 3,411,192
_3179
Dsui_3180: Dsui_3180 - response regulator with CheY-like receiver domain and winged-helix DNA-binding domain, at 3,411,192 to 3,411,902
_3180
Dsui_3181: Dsui_3181 - RND family efflux transporter, MFP subunit, at 3,412,085 to 3,413,245
_3181
Dsui_3182: Dsui_3182 - hydrophobe/amphiphile efflux-1 (HAE1) family transporter, at 3,413,242 to 3,416,382
_3182
Position (kb)
3412
3413
3414 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3411.132 kb on + strand at 3411.211 kb on - strand at 3411.268 kb on - strand, within Dsui_3180 at 3411.419 kb on - strand, within Dsui_3180 at 3411.490 kb on + strand at 3411.553 kb on - strand, within Dsui_3180 at 3411.610 kb on + strand, within Dsui_3180 at 3411.633 kb on + strand, within Dsui_3180 at 3411.749 kb on + strand at 3411.773 kb on + strand, within Dsui_3180 at 3411.781 kb on - strand, within Dsui_3180 at 3412.035 kb on - strand at 3412.038 kb on + strand at 3412.045 kb on - strand at 3412.050 kb on - strand at 3412.163 kb on + strand at 3412.260 kb on - strand at 3412.324 kb on + strand at 3412.356 kb on - strand at 3412.406 kb on + strand at 3412.466 kb on - strand at 3412.550 kb on - strand at 3412.560 kb on - strand at 3412.570 kb on - strand at 3412.669 kb on - strand at 3412.825 kb on + strand at 3412.833 kb on - strand, within Dsui_3181 at 3412.913 kb on - strand at 3412.989 kb on - strand at 3412.990 kb on - strand at 3413.211 kb on - strand at 3413.211 kb on - strand at 3413.381 kb on - strand at 3413.525 kb on + strand at 3413.551 kb on - strand at 3413.585 kb on - strand at 3413.632 kb on - strand at 3413.663 kb on - strand at 3413.675 kb on + strand at 3413.776 kb on - strand, within Dsui_3182 at 3414.025 kb on - strand at 3414.025 kb on - strand, within Dsui_3182 at 3414.025 kb on - strand at 3414.066 kb on + strand at 3414.194 kb on - strand, within Dsui_3182
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 3,411,132 + -1.0 3,411,211 - +0.9 3,411,268 - Dsui_3180 0.11 +0.3 3,411,419 - Dsui_3180 0.32 +0.6 3,411,490 + -0.8 3,411,553 - Dsui_3180 0.51 +1.7 3,411,610 + Dsui_3180 0.59 -1.5 3,411,633 + Dsui_3180 0.62 -1.5 3,411,749 + -3.0 3,411,773 + Dsui_3180 0.82 -2.3 3,411,781 - Dsui_3180 0.83 -0.0 3,412,035 - +0.4 3,412,038 + +2.4 3,412,045 - +0.7 3,412,050 - +1.5 3,412,163 + +0.2 3,412,260 - -2.2 3,412,324 + -0.7 3,412,356 - -1.2 3,412,406 + -2.9 3,412,466 - -0.4 3,412,550 - -1.2 3,412,560 - +0.5 3,412,570 - -2.1 3,412,669 - +0.0 3,412,825 + -2.9 3,412,833 - Dsui_3181 0.64 -4.1 3,412,913 - +0.4 3,412,989 - -2.3 3,412,990 - +1.2 3,413,211 - -2.9 3,413,211 - -2.2 3,413,381 - -2.0 3,413,525 + +0.5 3,413,551 - -0.3 3,413,585 - -2.5 3,413,632 - -1.7 3,413,663 - -2.6 3,413,675 + -1.5 3,413,776 - Dsui_3182 0.17 -0.0 3,414,025 - -3.9 3,414,025 - Dsui_3182 0.25 +0.3 3,414,025 - +1.5 3,414,066 + -2.6 3,414,194 - Dsui_3182 0.30 -2.3
Or see this region's nucleotide sequence