Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3021 and Dsui_3022 overlap by 4 nucleotides Dsui_3022 and Dsui_3023 are separated by 66 nucleotides Dsui_3023 and Dsui_3024 are separated by 9 nucleotides Dsui_3024 and Dsui_3025 are separated by 82 nucleotides
Dsui_3021: Dsui_3021 - putative permease, DMT superfamily, at 3,234,026 to 3,234,913
_3021
Dsui_3022: Dsui_3022 - hypothetical protein, at 3,234,910 to 3,235,074
_3022
Dsui_3023: Dsui_3023 - phosphate/sulfate permease, at 3,235,141 to 3,236,148
_3023
Dsui_3024: Dsui_3024 - phosphate transport regulator related to PhoU, at 3,236,158 to 3,236,781
_3024
Dsui_3025: Dsui_3025 - hypothetical protein, at 3,236,864 to 3,237,610
_3025
Position (kb)
3235
3236
3237 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3234.166 kb on + strand, within Dsui_3021 at 3234.166 kb on + strand at 3234.166 kb on + strand, within Dsui_3021 at 3234.180 kb on - strand, within Dsui_3021 at 3234.217 kb on - strand, within Dsui_3021 at 3234.253 kb on + strand, within Dsui_3021 at 3234.266 kb on + strand, within Dsui_3021 at 3234.371 kb on + strand, within Dsui_3021 at 3234.383 kb on + strand at 3234.421 kb on - strand, within Dsui_3021 at 3234.421 kb on - strand, within Dsui_3021 at 3234.428 kb on + strand, within Dsui_3021 at 3234.454 kb on - strand, within Dsui_3021 at 3234.454 kb on - strand, within Dsui_3021 at 3234.586 kb on - strand at 3234.594 kb on - strand, within Dsui_3021 at 3234.610 kb on - strand, within Dsui_3021 at 3234.710 kb on - strand, within Dsui_3021 at 3234.740 kb on + strand, within Dsui_3021 at 3234.751 kb on + strand, within Dsui_3021 at 3234.772 kb on + strand, within Dsui_3021 at 3234.779 kb on + strand, within Dsui_3021 at 3234.894 kb on + strand at 3234.894 kb on + strand at 3234.902 kb on - strand at 3234.902 kb on - strand at 3235.040 kb on - strand, within Dsui_3022 at 3235.069 kb on + strand at 3235.111 kb on - strand at 3235.111 kb on - strand at 3235.198 kb on - strand at 3235.258 kb on - strand, within Dsui_3023 at 3235.258 kb on - strand, within Dsui_3023 at 3235.441 kb on + strand, within Dsui_3023 at 3235.490 kb on + strand, within Dsui_3023 at 3235.498 kb on - strand, within Dsui_3023 at 3235.510 kb on + strand, within Dsui_3023 at 3235.578 kb on + strand, within Dsui_3023 at 3235.586 kb on - strand, within Dsui_3023 at 3235.679 kb on - strand, within Dsui_3023 at 3235.744 kb on - strand, within Dsui_3023 at 3235.761 kb on + strand, within Dsui_3023 at 3235.777 kb on - strand, within Dsui_3023 at 3235.857 kb on - strand, within Dsui_3023 at 3236.014 kb on - strand, within Dsui_3023 at 3236.156 kb on + strand at 3236.251 kb on - strand, within Dsui_3024 at 3236.276 kb on - strand, within Dsui_3024 at 3236.362 kb on - strand, within Dsui_3024 at 3236.376 kb on + strand, within Dsui_3024 at 3236.522 kb on - strand, within Dsui_3024 at 3236.545 kb on + strand, within Dsui_3024 at 3236.681 kb on + strand, within Dsui_3024 at 3236.710 kb on + strand, within Dsui_3024 at 3236.710 kb on + strand, within Dsui_3024 at 3236.710 kb on + strand, within Dsui_3024 at 3236.712 kb on - strand, within Dsui_3024 at 3236.718 kb on - strand, within Dsui_3024 at 3236.744 kb on + strand at 3236.752 kb on - strand at 3236.909 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 3,234,166 + Dsui_3021 0.16 +0.2 3,234,166 + +1.1 3,234,166 + Dsui_3021 0.16 +0.3 3,234,180 - Dsui_3021 0.17 +1.1 3,234,217 - Dsui_3021 0.22 +0.0 3,234,253 + Dsui_3021 0.26 +0.1 3,234,266 + Dsui_3021 0.27 -0.6 3,234,371 + Dsui_3021 0.39 -0.9 3,234,383 + -1.7 3,234,421 - Dsui_3021 0.44 -0.2 3,234,421 - Dsui_3021 0.44 +1.8 3,234,428 + Dsui_3021 0.45 +0.2 3,234,454 - Dsui_3021 0.48 +0.5 3,234,454 - Dsui_3021 0.48 +0.4 3,234,586 - +0.9 3,234,594 - Dsui_3021 0.64 +0.2 3,234,610 - Dsui_3021 0.66 +0.7 3,234,710 - Dsui_3021 0.77 +0.8 3,234,740 + Dsui_3021 0.80 -1.5 3,234,751 + Dsui_3021 0.82 -0.1 3,234,772 + Dsui_3021 0.84 -0.1 3,234,779 + Dsui_3021 0.85 +0.5 3,234,894 + -0.2 3,234,894 + +0.1 3,234,902 - +0.4 3,234,902 - +0.3 3,235,040 - Dsui_3022 0.79 +0.6 3,235,069 + +0.3 3,235,111 - +0.8 3,235,111 - +1.6 3,235,198 - +0.5 3,235,258 - Dsui_3023 0.12 +0.7 3,235,258 - Dsui_3023 0.12 +1.2 3,235,441 + Dsui_3023 0.30 -0.2 3,235,490 + Dsui_3023 0.35 +1.1 3,235,498 - Dsui_3023 0.35 +0.6 3,235,510 + Dsui_3023 0.37 +0.8 3,235,578 + Dsui_3023 0.43 -0.0 3,235,586 - Dsui_3023 0.44 +2.0 3,235,679 - Dsui_3023 0.53 +1.2 3,235,744 - Dsui_3023 0.60 +1.2 3,235,761 + Dsui_3023 0.62 +0.2 3,235,777 - Dsui_3023 0.63 +1.4 3,235,857 - Dsui_3023 0.71 +1.2 3,236,014 - Dsui_3023 0.87 +1.1 3,236,156 + -0.3 3,236,251 - Dsui_3024 0.15 -0.5 3,236,276 - Dsui_3024 0.19 +0.7 3,236,362 - Dsui_3024 0.33 +1.0 3,236,376 + Dsui_3024 0.35 -1.2 3,236,522 - Dsui_3024 0.58 +1.5 3,236,545 + Dsui_3024 0.62 +0.0 3,236,681 + Dsui_3024 0.84 -0.9 3,236,710 + Dsui_3024 0.88 +0.1 3,236,710 + Dsui_3024 0.88 +0.4 3,236,710 + Dsui_3024 0.88 -2.0 3,236,712 - Dsui_3024 0.89 +0.2 3,236,718 - Dsui_3024 0.90 +1.2 3,236,744 + -1.3 3,236,752 - +1.8 3,236,909 - +0.6
Or see this region's nucleotide sequence