Strain Fitness in Dechlorosoma suillum PS around Dsui_2765

Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2763 and Dsui_2764 are separated by 142 nucleotidesDsui_2764 and Dsui_2765 are separated by 4 nucleotidesDsui_2765 and Dsui_2766 are separated by 79 nucleotides Dsui_2763: Dsui_2763 - ribosome biogenesis GTP-binding protein YlqF, at 2,922,160 to 2,923,074 _2763 Dsui_2764: Dsui_2764 - hypothetical protein, at 2,923,217 to 2,923,468 _2764 Dsui_2765: Dsui_2765 - putative membrane protein, at 2,923,473 to 2,924,222 _2765 Dsui_2766: Dsui_2766 - putative homoserine kinase type II (protein kinase fold), at 2,924,302 to 2,925,309 _2766 Position (kb) 2923 2924 2925Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2923.115 kb on - strandat 2923.222 kb on - strandat 2923.370 kb on - strand, within Dsui_2764at 2923.493 kb on + strandat 2923.501 kb on - strandat 2923.510 kb on + strandat 2923.511 kb on - strandat 2923.555 kb on + strand, within Dsui_2765at 2923.597 kb on + strand, within Dsui_2765at 2923.696 kb on - strand, within Dsui_2765at 2923.788 kb on - strand, within Dsui_2765at 2923.799 kb on - strand, within Dsui_2765at 2923.822 kb on + strand, within Dsui_2765at 2923.887 kb on + strand, within Dsui_2765at 2924.057 kb on + strand, within Dsui_2765at 2924.139 kb on - strand, within Dsui_2765at 2924.139 kb on - strand, within Dsui_2765at 2924.159 kb on + strandat 2924.209 kb on - strandat 2924.270 kb on + strandat 2924.326 kb on + strandat 2924.484 kb on + strand, within Dsui_2766at 2924.610 kb on - strandat 2924.784 kb on + strand, within Dsui_2766at 2924.868 kb on - strandat 2924.944 kb on + strand, within Dsui_2766at 2925.008 kb on + strand, within Dsui_2766at 2925.107 kb on + strand, within Dsui_2766at 2925.210 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate
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2,923,115 - +1.1
2,923,222 - +0.9
2,923,370 - Dsui_2764 0.61 -0.2
2,923,493 + +0.7
2,923,501 - +1.0
2,923,510 + +0.8
2,923,511 - -0.0
2,923,555 + Dsui_2765 0.11 +0.9
2,923,597 + Dsui_2765 0.17 +2.0
2,923,696 - Dsui_2765 0.30 -0.4
2,923,788 - Dsui_2765 0.42 +2.8
2,923,799 - Dsui_2765 0.43 +1.0
2,923,822 + Dsui_2765 0.47 +0.9
2,923,887 + Dsui_2765 0.55 +0.5
2,924,057 + Dsui_2765 0.78 +2.0
2,924,139 - Dsui_2765 0.89 +0.9
2,924,139 - Dsui_2765 0.89 +1.5
2,924,159 + -2.9
2,924,209 - +0.6
2,924,270 + +1.5
2,924,326 + +0.6
2,924,484 + Dsui_2766 0.18 +0.8
2,924,610 - -0.1
2,924,784 + Dsui_2766 0.48 +0.1
2,924,868 - -2.4
2,924,944 + Dsui_2766 0.64 +0.2
2,925,008 + Dsui_2766 0.70 +0.6
2,925,107 + Dsui_2766 0.80 +0.8
2,925,210 + +0.0

Or see this region's nucleotide sequence