Strain Fitness in Dechlorosoma suillum PS around Dsui_2751

Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2750 and Dsui_2751 are separated by 76 nucleotidesDsui_2751 and Dsui_2752 are separated by 300 nucleotides Dsui_2750: Dsui_2750 - cyanophycin synthetase, at 2,905,615 to 2,908,200 _2750 Dsui_2751: Dsui_2751 - cyanophycin synthetase, at 2,908,277 to 2,910,445 _2751 Dsui_2752: Dsui_2752 - ABC-type multidrug transport system, ATPase and permease component, at 2,910,746 to 2,912,953 _2752 Position (kb) 2908 2909 2910 2911Strain fitness (log2 ratio) -2 -1 0 1 2 3at 2907.428 kb on + strand, within Dsui_2750at 2907.572 kb on + strand, within Dsui_2750at 2907.572 kb on + strand, within Dsui_2750at 2907.663 kb on + strand, within Dsui_2750at 2907.668 kb on + strandat 2907.671 kb on - strand, within Dsui_2750at 2907.671 kb on - strand, within Dsui_2750at 2907.703 kb on - strand, within Dsui_2750at 2907.786 kb on - strand, within Dsui_2750at 2907.811 kb on + strandat 2907.902 kb on - strand, within Dsui_2750at 2907.921 kb on - strand, within Dsui_2750at 2907.964 kb on + strandat 2908.169 kb on - strandat 2908.169 kb on - strandat 2908.184 kb on - strandat 2908.244 kb on + strandat 2908.295 kb on + strandat 2908.303 kb on - strandat 2908.357 kb on - strandat 2908.466 kb on + strandat 2908.532 kb on - strand, within Dsui_2751at 2908.662 kb on + strandat 2908.672 kb on - strand, within Dsui_2751at 2908.866 kb on + strand, within Dsui_2751at 2908.874 kb on - strand, within Dsui_2751at 2908.896 kb on - strand, within Dsui_2751at 2909.048 kb on - strand, within Dsui_2751at 2909.060 kb on - strand, within Dsui_2751at 2909.156 kb on - strand, within Dsui_2751at 2909.156 kb on - strand, within Dsui_2751at 2909.168 kb on - strand, within Dsui_2751at 2909.181 kb on - strand, within Dsui_2751at 2909.574 kb on + strandat 2909.619 kb on - strand, within Dsui_2751at 2909.619 kb on - strand, within Dsui_2751at 2909.886 kb on + strandat 2909.953 kb on + strandat 2910.063 kb on - strand, within Dsui_2751at 2910.098 kb on - strand, within Dsui_2751at 2910.183 kb on - strand, within Dsui_2751at 2910.258 kb on - strandat 2910.286 kb on + strandat 2910.294 kb on - strandat 2910.392 kb on - strandat 2910.392 kb on - strandat 2910.407 kb on - strandat 2910.414 kb on - strandat 2910.448 kb on - strandat 2910.449 kb on - strandat 2910.488 kb on - strandat 2910.488 kb on - strandat 2910.488 kb on - strandat 2910.488 kb on - strandat 2910.547 kb on + strandat 2910.555 kb on - strandat 2910.555 kb on - strandat 2910.555 kb on - strandat 2910.573 kb on + strandat 2910.581 kb on - strandat 2910.589 kb on + strandat 2910.589 kb on + strandat 2910.597 kb on - strandat 2910.651 kb on + strandat 2910.651 kb on + strandat 2911.316 kb on + strand, within Dsui_2752at 2911.414 kb on + strand, within Dsui_2752

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Per-strain Table

Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate
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2,907,428 + Dsui_2750 0.70 +0.9
2,907,572 + Dsui_2750 0.76 -2.2
2,907,572 + Dsui_2750 0.76 +1.0
2,907,663 + Dsui_2750 0.79 +1.0
2,907,668 + +2.5
2,907,671 - Dsui_2750 0.80 +1.0
2,907,671 - Dsui_2750 0.80 +1.3
2,907,703 - Dsui_2750 0.81 +0.7
2,907,786 - Dsui_2750 0.84 +1.4
2,907,811 + -1.5
2,907,902 - Dsui_2750 0.88 +1.8
2,907,921 - Dsui_2750 0.89 +1.6
2,907,964 + +2.4
2,908,169 - +0.9
2,908,169 - +0.8
2,908,184 - +1.2
2,908,244 + +2.4
2,908,295 + +3.0
2,908,303 - +0.9
2,908,357 - +1.6
2,908,466 + -1.8
2,908,532 - Dsui_2751 0.12 +0.8
2,908,662 + -0.6
2,908,672 - Dsui_2751 0.18 +0.8
2,908,866 + Dsui_2751 0.27 -1.6
2,908,874 - Dsui_2751 0.28 +0.1
2,908,896 - Dsui_2751 0.29 +1.4
2,909,048 - Dsui_2751 0.36 +2.0
2,909,060 - Dsui_2751 0.36 +0.7
2,909,156 - Dsui_2751 0.41 +1.3
2,909,156 - Dsui_2751 0.41 +1.5
2,909,168 - Dsui_2751 0.41 +0.8
2,909,181 - Dsui_2751 0.42 +0.9
2,909,574 + -1.0
2,909,619 - Dsui_2751 0.62 +1.6
2,909,619 - Dsui_2751 0.62 -0.6
2,909,886 + -1.6
2,909,953 + +0.0
2,910,063 - Dsui_2751 0.82 +1.1
2,910,098 - Dsui_2751 0.84 +1.7
2,910,183 - Dsui_2751 0.88 +1.9
2,910,258 - +0.0
2,910,286 + -1.6
2,910,294 - +1.7
2,910,392 - +2.1
2,910,392 - +1.5
2,910,407 - +1.0
2,910,414 - +1.3
2,910,448 - +1.0
2,910,449 - +0.4
2,910,488 - +0.4
2,910,488 - +1.1
2,910,488 - +0.9
2,910,488 - +1.4
2,910,547 + +1.0
2,910,555 - +0.8
2,910,555 - +1.1
2,910,555 - +0.7
2,910,573 + +1.4
2,910,581 - -2.4
2,910,589 + +1.3
2,910,589 + +1.6
2,910,597 - -0.8
2,910,651 + -0.2
2,910,651 + +0.0
2,911,316 + Dsui_2752 0.26 -1.0
2,911,414 + Dsui_2752 0.30 -1.0

Or see this region's nucleotide sequence