Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2713 and Dsui_2714 are separated by 60 nucleotides Dsui_2714 and Dsui_2715 are separated by 14 nucleotides Dsui_2715 and Dsui_2716 are separated by 36 nucleotides Dsui_2716 and Dsui_2717 are separated by 143 nucleotides Dsui_2717 and Dsui_2718 are separated by 115 nucleotides
Dsui_2713: Dsui_2713 - membrane protease subunit, stomatin/prohibitin, at 2,870,148 to 2,871,041
_2713
Dsui_2714: Dsui_2714 - tRNA-His, at 2,871,102 to 2,871,177
_2714
Dsui_2715: Dsui_2715 - tRNA-Arg, at 2,871,192 to 2,871,268
_2715
Dsui_2716: Dsui_2716 - tRNA-Pro, at 2,871,305 to 2,871,381
_2716
Dsui_2717: Dsui_2717 - RNA polymerase-binding protein DksA, at 2,871,525 to 2,871,950
_2717
Dsui_2718: Dsui_2718 - polyribonucleotide nucleotidyltransferase, at 2,872,066 to 2,874,189
_2718
Position (kb)
2871
2872 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2870.574 kb on + strand, within Dsui_2713 at 2870.628 kb on - strand, within Dsui_2713 at 2870.656 kb on - strand, within Dsui_2713 at 2870.726 kb on + strand, within Dsui_2713 at 2870.726 kb on + strand, within Dsui_2713 at 2870.818 kb on - strand, within Dsui_2713 at 2870.878 kb on - strand, within Dsui_2713 at 2870.992 kb on + strand at 2871.000 kb on - strand at 2871.009 kb on + strand at 2871.295 kb on - strand at 2871.528 kb on + strand at 2871.585 kb on + strand, within Dsui_2717 at 2871.644 kb on + strand, within Dsui_2717 at 2871.669 kb on + strand, within Dsui_2717 at 2871.696 kb on + strand, within Dsui_2717 at 2871.742 kb on + strand, within Dsui_2717 at 2871.870 kb on + strand, within Dsui_2717 at 2872.321 kb on - strand, within Dsui_2718 at 2872.327 kb on - strand, within Dsui_2718
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 2,870,574 + Dsui_2713 0.48 +0.4 2,870,628 - Dsui_2713 0.54 +0.3 2,870,656 - Dsui_2713 0.57 +0.2 2,870,726 + Dsui_2713 0.65 -0.8 2,870,726 + Dsui_2713 0.65 +0.6 2,870,818 - Dsui_2713 0.75 +1.3 2,870,878 - Dsui_2713 0.82 +0.9 2,870,992 + +0.4 2,871,000 - +0.7 2,871,009 + +0.7 2,871,295 - +0.1 2,871,528 + +1.2 2,871,585 + Dsui_2717 0.14 -3.9 2,871,644 + Dsui_2717 0.28 -1.6 2,871,669 + Dsui_2717 0.34 +0.2 2,871,696 + Dsui_2717 0.40 +1.2 2,871,742 + Dsui_2717 0.51 -2.7 2,871,870 + Dsui_2717 0.81 -2.2 2,872,321 - Dsui_2718 0.12 +0.7 2,872,327 - Dsui_2718 0.12 +0.8
Or see this region's nucleotide sequence