Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2695 and Dsui_2696 are separated by 5 nucleotides Dsui_2696 and Dsui_2697 are separated by 57 nucleotides Dsui_2697 and Dsui_2698 are separated by 2 nucleotides
Dsui_2695: Dsui_2695 - methionine aminopeptidase, type I, at 2,846,891 to 2,847,688
_2695
Dsui_2696: Dsui_2696 - (protein-PII) uridylyltransferase, at 2,847,694 to 2,850,285
_2696
Dsui_2697: Dsui_2697 - peptide deformylase, at 2,850,343 to 2,850,891
_2697
Dsui_2698: Dsui_2698 - purine nucleoside phosphorylase, at 2,850,894 to 2,851,646
_2698
Position (kb)
2847
2848
2849
2850
2851 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2846.830 kb on + strand at 2846.830 kb on + strand at 2846.830 kb on + strand at 2846.844 kb on - strand at 2846.847 kb on + strand at 2846.847 kb on + strand at 2846.860 kb on + strand at 2846.871 kb on + strand at 2846.982 kb on + strand, within Dsui_2695 at 2846.984 kb on - strand, within Dsui_2695 at 2847.065 kb on + strand, within Dsui_2695 at 2847.126 kb on + strand, within Dsui_2695 at 2847.134 kb on - strand, within Dsui_2695 at 2847.210 kb on - strand at 2847.229 kb on - strand, within Dsui_2695 at 2847.254 kb on + strand, within Dsui_2695 at 2847.317 kb on - strand, within Dsui_2695 at 2847.319 kb on + strand, within Dsui_2695 at 2847.337 kb on + strand, within Dsui_2695 at 2847.449 kb on + strand, within Dsui_2695 at 2847.450 kb on - strand, within Dsui_2695 at 2847.466 kb on + strand, within Dsui_2695 at 2847.494 kb on + strand, within Dsui_2695 at 2847.515 kb on - strand, within Dsui_2695 at 2847.644 kb on - strand at 2847.649 kb on - strand at 2847.667 kb on + strand at 2847.696 kb on + strand at 2847.715 kb on + strand at 2847.830 kb on + strand at 2847.838 kb on - strand at 2847.878 kb on + strand at 2847.918 kb on + strand at 2848.053 kb on - strand at 2848.115 kb on - strand, within Dsui_2696 at 2848.175 kb on + strand, within Dsui_2696 at 2848.191 kb on - strand, within Dsui_2696 at 2848.226 kb on - strand, within Dsui_2696 at 2848.299 kb on + strand, within Dsui_2696 at 2848.306 kb on - strand, within Dsui_2696 at 2848.338 kb on + strand at 2848.362 kb on - strand, within Dsui_2696 at 2848.438 kb on + strand, within Dsui_2696 at 2848.601 kb on - strand at 2848.751 kb on + strand, within Dsui_2696 at 2848.804 kb on - strand at 2848.886 kb on - strand, within Dsui_2696 at 2848.960 kb on - strand, within Dsui_2696 at 2848.980 kb on + strand, within Dsui_2696 at 2849.001 kb on + strand, within Dsui_2696 at 2849.039 kb on - strand, within Dsui_2696 at 2849.144 kb on - strand, within Dsui_2696 at 2849.146 kb on + strand, within Dsui_2696 at 2849.159 kb on - strand, within Dsui_2696 at 2849.191 kb on + strand, within Dsui_2696 at 2849.194 kb on - strand at 2849.288 kb on - strand, within Dsui_2696 at 2849.291 kb on + strand, within Dsui_2696 at 2849.299 kb on - strand, within Dsui_2696 at 2849.332 kb on + strand, within Dsui_2696 at 2849.376 kb on - strand, within Dsui_2696 at 2849.420 kb on + strand, within Dsui_2696 at 2849.428 kb on - strand, within Dsui_2696 at 2849.428 kb on - strand at 2849.463 kb on + strand, within Dsui_2696 at 2849.498 kb on - strand, within Dsui_2696 at 2849.584 kb on + strand, within Dsui_2696 at 2849.695 kb on + strand, within Dsui_2696 at 2849.772 kb on - strand, within Dsui_2696 at 2849.855 kb on - strand, within Dsui_2696 at 2849.890 kb on - strand, within Dsui_2696 at 2849.890 kb on - strand, within Dsui_2696 at 2849.952 kb on + strand, within Dsui_2696 at 2850.050 kb on - strand at 2850.124 kb on + strand at 2850.124 kb on + strand at 2850.221 kb on + strand at 2850.221 kb on + strand at 2850.281 kb on - strand at 2850.293 kb on - strand at 2850.299 kb on - strand at 2850.462 kb on + strand, within Dsui_2697 at 2850.470 kb on - strand, within Dsui_2697 at 2850.490 kb on - strand, within Dsui_2697 at 2850.584 kb on - strand, within Dsui_2697 at 2850.619 kb on + strand at 2850.674 kb on - strand, within Dsui_2697 at 2850.722 kb on - strand, within Dsui_2697 at 2850.821 kb on - strand, within Dsui_2697 at 2851.056 kb on - strand, within Dsui_2698 at 2851.114 kb on + strand, within Dsui_2698 at 2851.114 kb on + strand at 2851.132 kb on + strand, within Dsui_2698 at 2851.163 kb on + strand, within Dsui_2698 at 2851.182 kb on + strand, within Dsui_2698 at 2851.263 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 2,846,830 + +0.2 2,846,830 + -0.9 2,846,830 + +1.5 2,846,844 - -1.3 2,846,847 + -0.1 2,846,847 + +0.9 2,846,860 + +1.7 2,846,871 + +0.4 2,846,982 + Dsui_2695 0.11 -0.1 2,846,984 - Dsui_2695 0.12 -3.4 2,847,065 + Dsui_2695 0.22 -0.1 2,847,126 + Dsui_2695 0.29 -0.7 2,847,134 - Dsui_2695 0.30 -3.5 2,847,210 - -1.9 2,847,229 - Dsui_2695 0.42 -3.1 2,847,254 + Dsui_2695 0.45 -0.2 2,847,317 - Dsui_2695 0.53 -0.9 2,847,319 + Dsui_2695 0.54 +0.5 2,847,337 + Dsui_2695 0.56 +0.2 2,847,449 + Dsui_2695 0.70 +0.5 2,847,450 - Dsui_2695 0.70 -1.0 2,847,466 + Dsui_2695 0.72 +0.6 2,847,494 + Dsui_2695 0.76 +1.1 2,847,515 - Dsui_2695 0.78 -2.5 2,847,644 - -1.9 2,847,649 - -0.2 2,847,667 + +1.8 2,847,696 + +0.5 2,847,715 + +0.2 2,847,830 + -0.4 2,847,838 - -2.0 2,847,878 + -1.5 2,847,918 + -1.1 2,848,053 - -2.5 2,848,115 - Dsui_2696 0.16 -2.9 2,848,175 + Dsui_2696 0.19 +0.4 2,848,191 - Dsui_2696 0.19 -1.6 2,848,226 - Dsui_2696 0.21 -0.0 2,848,299 + Dsui_2696 0.23 +0.7 2,848,306 - Dsui_2696 0.24 -2.2 2,848,338 + -1.0 2,848,362 - Dsui_2696 0.26 -1.2 2,848,438 + Dsui_2696 0.29 +0.5 2,848,601 - -1.7 2,848,751 + Dsui_2696 0.41 +0.8 2,848,804 - -2.4 2,848,886 - Dsui_2696 0.46 -2.3 2,848,960 - Dsui_2696 0.49 -2.4 2,848,980 + Dsui_2696 0.50 -0.5 2,849,001 + Dsui_2696 0.50 +0.6 2,849,039 - Dsui_2696 0.52 +0.8 2,849,144 - Dsui_2696 0.56 +0.4 2,849,146 + Dsui_2696 0.56 +0.7 2,849,159 - Dsui_2696 0.57 +0.5 2,849,191 + Dsui_2696 0.58 +1.2 2,849,194 - -1.7 2,849,288 - Dsui_2696 0.61 -0.8 2,849,291 + Dsui_2696 0.62 -0.1 2,849,299 - Dsui_2696 0.62 -1.9 2,849,332 + Dsui_2696 0.63 +0.8 2,849,376 - Dsui_2696 0.65 +0.1 2,849,420 + Dsui_2696 0.67 -0.1 2,849,428 - Dsui_2696 0.67 +0.8 2,849,428 - -0.7 2,849,463 + Dsui_2696 0.68 +1.2 2,849,498 - Dsui_2696 0.70 -2.8 2,849,584 + Dsui_2696 0.73 +0.0 2,849,695 + Dsui_2696 0.77 +0.7 2,849,772 - Dsui_2696 0.80 -2.1 2,849,855 - Dsui_2696 0.83 -2.0 2,849,890 - Dsui_2696 0.85 -1.0 2,849,890 - Dsui_2696 0.85 +0.4 2,849,952 + Dsui_2696 0.87 -0.9 2,850,050 - -1.0 2,850,124 + -0.6 2,850,124 + -1.3 2,850,221 + +0.2 2,850,221 + -1.3 2,850,281 - +1.0 2,850,293 - +1.5 2,850,299 - +0.2 2,850,462 + Dsui_2697 0.22 +0.1 2,850,470 - Dsui_2697 0.23 +0.6 2,850,490 - Dsui_2697 0.27 +1.4 2,850,584 - Dsui_2697 0.44 -0.7 2,850,619 + -0.4 2,850,674 - Dsui_2697 0.60 +1.7 2,850,722 - Dsui_2697 0.69 +1.7 2,850,821 - Dsui_2697 0.87 +1.4 2,851,056 - Dsui_2698 0.22 -1.2 2,851,114 + Dsui_2698 0.29 -3.5 2,851,114 + -2.8 2,851,132 + Dsui_2698 0.32 -2.3 2,851,163 + Dsui_2698 0.36 -2.9 2,851,182 + Dsui_2698 0.38 -3.6 2,851,263 + -3.0
Or see this region's nucleotide sequence