Strain Fitness in Dechlorosoma suillum PS around Dsui_2675

Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2672 and Dsui_2673 are separated by 50 nucleotidesDsui_2673 and Dsui_2674 overlap by 8 nucleotidesDsui_2674 and Dsui_2675 are separated by 60 nucleotidesDsui_2675 and Dsui_2676 overlap by 1 nucleotidesDsui_2676 and Dsui_2677 are separated by 199 nucleotides Dsui_2672: Dsui_2672 - hypothetical protein, at 2,825,746 to 2,826,096 _2672 Dsui_2673: Dsui_2673 - hypothetical protein, at 2,826,147 to 2,826,470 _2673 Dsui_2674: Dsui_2674 - oligoketide cyclase/lipid transport protein, at 2,826,463 to 2,826,894 _2674 Dsui_2675: Dsui_2675 - SsrA-binding protein, at 2,826,955 to 2,827,401 _2675 Dsui_2676: Dsui_2676 - putative membrane protein, at 2,827,401 to 2,828,021 _2676 Dsui_2677: Dsui_2677 - phosphoenolpyruvate synthase, at 2,828,221 to 2,830,596 _2677 Position (kb) 2826 2827 2828Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2825.969 kb on + strand, within Dsui_2672at 2826.065 kb on - strandat 2826.091 kb on + strandat 2826.096 kb on - strandat 2826.102 kb on + strandat 2826.115 kb on - strandat 2826.115 kb on - strandat 2826.115 kb on - strandat 2826.115 kb on - strandat 2826.130 kb on + strandat 2826.139 kb on - strandat 2826.228 kb on - strand, within Dsui_2673at 2826.294 kb on - strand, within Dsui_2673at 2826.365 kb on - strand, within Dsui_2673at 2826.409 kb on - strand, within Dsui_2673at 2826.897 kb on - strandat 2826.897 kb on - strandat 2826.980 kb on - strandat 2827.403 kb on - strandat 2827.426 kb on - strandat 2827.429 kb on - strandat 2827.439 kb on - strandat 2827.530 kb on + strand, within Dsui_2676at 2827.598 kb on - strand, within Dsui_2676at 2827.612 kb on - strand, within Dsui_2676at 2827.995 kb on - strandat 2828.010 kb on + strandat 2828.018 kb on - strandat 2828.076 kb on + strandat 2828.125 kb on + strandat 2828.133 kb on - strandat 2828.191 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate
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2,825,969 + Dsui_2672 0.64 +1.1
2,826,065 - +0.8
2,826,091 + +1.5
2,826,096 - +0.7
2,826,102 + +2.1
2,826,115 - +1.1
2,826,115 - +1.6
2,826,115 - +1.2
2,826,115 - +0.5
2,826,130 + +1.1
2,826,139 - +1.4
2,826,228 - Dsui_2673 0.25 +0.8
2,826,294 - Dsui_2673 0.45 -0.3
2,826,365 - Dsui_2673 0.67 -3.1
2,826,409 - Dsui_2673 0.81 -2.2
2,826,897 - +0.7
2,826,897 - +1.4
2,826,980 - +0.1
2,827,403 - +0.2
2,827,426 - +1.8
2,827,429 - +0.4
2,827,439 - +0.8
2,827,530 + Dsui_2676 0.21 +1.0
2,827,598 - Dsui_2676 0.32 +2.0
2,827,612 - Dsui_2676 0.34 +0.8
2,827,995 - +0.4
2,828,010 + +1.0
2,828,018 - +1.1
2,828,076 + +0.5
2,828,125 + +0.8
2,828,133 - +1.9
2,828,191 + +0.9

Or see this region's nucleotide sequence