Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2650 and Dsui_2651 are separated by 68 nucleotides Dsui_2651 and Dsui_2652 are separated by 16 nucleotides Dsui_2652 and Dsui_2653 are separated by 29 nucleotides
Dsui_2650: Dsui_2650 - TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component, at 2,806,466 to 2,807,458
_2650
Dsui_2651: Dsui_2651 - ankyrin repeat-containing protein, at 2,807,527 to 2,808,171
_2651
Dsui_2652: Dsui_2652 - hydrolase, TatD family, at 2,808,188 to 2,808,970
_2652
Dsui_2653: Dsui_2653 - Tfp pilus assembly protein PilZ, at 2,809,000 to 2,809,386
_2653
Position (kb)
2807
2808
2809 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4
5 at 2806.598 kb on + strand, within Dsui_2650 at 2806.606 kb on - strand, within Dsui_2650 at 2806.674 kb on - strand, within Dsui_2650 at 2806.735 kb on + strand, within Dsui_2650 at 2806.744 kb on + strand at 2806.744 kb on + strand at 2806.752 kb on - strand, within Dsui_2650 at 2806.762 kb on + strand, within Dsui_2650 at 2806.812 kb on + strand, within Dsui_2650 at 2806.889 kb on - strand, within Dsui_2650 at 2806.924 kb on + strand, within Dsui_2650 at 2806.924 kb on + strand, within Dsui_2650 at 2807.071 kb on - strand, within Dsui_2650 at 2807.071 kb on - strand, within Dsui_2650 at 2807.072 kb on - strand, within Dsui_2650 at 2807.106 kb on - strand, within Dsui_2650 at 2807.120 kb on + strand, within Dsui_2650 at 2807.356 kb on - strand, within Dsui_2650 at 2807.362 kb on - strand at 2807.425 kb on + strand at 2807.437 kb on + strand at 2807.468 kb on - strand at 2807.530 kb on + strand at 2807.530 kb on + strand at 2807.540 kb on + strand at 2807.604 kb on - strand, within Dsui_2651 at 2807.619 kb on + strand at 2807.637 kb on - strand at 2807.933 kb on - strand, within Dsui_2651 at 2808.088 kb on - strand at 2808.088 kb on - strand, within Dsui_2651 at 2808.089 kb on - strand at 2808.152 kb on + strand at 2808.256 kb on + strand at 2808.265 kb on + strand at 2808.349 kb on + strand, within Dsui_2652 at 2808.369 kb on + strand at 2808.493 kb on + strand at 2808.513 kb on - strand, within Dsui_2652 at 2808.527 kb on + strand, within Dsui_2652 at 2808.580 kb on + strand at 2808.580 kb on + strand at 2808.617 kb on - strand, within Dsui_2652 at 2808.622 kb on - strand, within Dsui_2652 at 2808.624 kb on + strand, within Dsui_2652 at 2808.765 kb on + strand, within Dsui_2652 at 2808.773 kb on - strand, within Dsui_2652 at 2808.795 kb on - strand, within Dsui_2652 at 2808.815 kb on + strand at 2808.816 kb on + strand at 2808.835 kb on - strand, within Dsui_2652 at 2808.855 kb on - strand, within Dsui_2652 at 2808.941 kb on + strand at 2809.037 kb on - strand at 2809.063 kb on - strand, within Dsui_2653 at 2809.108 kb on + strand, within Dsui_2653 at 2809.123 kb on - strand, within Dsui_2653 at 2809.131 kb on - strand, within Dsui_2653
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 2,806,598 + Dsui_2650 0.13 +1.6 2,806,606 - Dsui_2650 0.14 +0.3 2,806,674 - Dsui_2650 0.21 +0.5 2,806,735 + Dsui_2650 0.27 +0.8 2,806,744 + +0.3 2,806,744 + +1.2 2,806,752 - Dsui_2650 0.29 +0.7 2,806,762 + Dsui_2650 0.30 +0.3 2,806,812 + Dsui_2650 0.35 -0.2 2,806,889 - Dsui_2650 0.43 +0.8 2,806,924 + Dsui_2650 0.46 +0.2 2,806,924 + Dsui_2650 0.46 +0.7 2,807,071 - Dsui_2650 0.61 -0.4 2,807,071 - Dsui_2650 0.61 +0.5 2,807,072 - Dsui_2650 0.61 -0.4 2,807,106 - Dsui_2650 0.64 +1.2 2,807,120 + Dsui_2650 0.66 +0.6 2,807,356 - Dsui_2650 0.90 +0.5 2,807,362 - +1.4 2,807,425 + +0.8 2,807,437 + -0.2 2,807,468 - -0.7 2,807,530 + +0.4 2,807,530 + +2.1 2,807,540 + -0.1 2,807,604 - Dsui_2651 0.12 -4.1 2,807,619 + -1.6 2,807,637 - -2.2 2,807,933 - Dsui_2651 0.63 -2.6 2,808,088 - -2.2 2,808,088 - Dsui_2651 0.87 -4.2 2,808,089 - +0.6 2,808,152 + +0.6 2,808,256 + -1.6 2,808,265 + +1.4 2,808,349 + Dsui_2652 0.21 -0.6 2,808,369 + -2.2 2,808,493 + -2.1 2,808,513 - Dsui_2652 0.42 +1.2 2,808,527 + Dsui_2652 0.43 +0.3 2,808,580 + -0.9 2,808,580 + +0.7 2,808,617 - Dsui_2652 0.55 +1.4 2,808,622 - Dsui_2652 0.55 +1.6 2,808,624 + Dsui_2652 0.56 -1.1 2,808,765 + Dsui_2652 0.74 +0.7 2,808,773 - Dsui_2652 0.75 +4.8 2,808,795 - Dsui_2652 0.78 +2.6 2,808,815 + +0.7 2,808,816 + -3.7 2,808,835 - Dsui_2652 0.83 +0.6 2,808,855 - Dsui_2652 0.85 +0.6 2,808,941 + -2.0 2,809,037 - +1.3 2,809,063 - Dsui_2653 0.16 +1.4 2,809,108 + Dsui_2653 0.28 +1.1 2,809,123 - Dsui_2653 0.32 +2.0 2,809,131 - Dsui_2653 0.34 +2.0
Or see this region's nucleotide sequence