Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2613 and Dsui_2614 are separated by 48 nucleotides Dsui_2614 and Dsui_2615 overlap by 4 nucleotides Dsui_2615 and Dsui_2616 overlap by 10 nucleotides Dsui_2616 and Dsui_2617 are separated by 477 nucleotides
Dsui_2613: Dsui_2613 - integrating conjugative element protein, PFL_4669 family, at 2,766,194 to 2,767,207
_2613
Dsui_2614: Dsui_2614 - hypothetical protein, at 2,767,256 to 2,768,056
_2614
Dsui_2615: Dsui_2615 - hypothetical protein, at 2,768,053 to 2,769,579
_2615
Dsui_2616: Dsui_2616 - hypothetical protein, at 2,769,570 to 2,769,788
_2616
Dsui_2617: Dsui_2617 - DNA recombination-dependent growth factor C, at 2,770,266 to 2,771,168
_2617
Position (kb)
2768
2769
2770 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2767.067 kb on + strand at 2767.144 kb on + strand at 2767.262 kb on - strand at 2767.597 kb on + strand, within Dsui_2614 at 2767.597 kb on + strand, within Dsui_2614 at 2767.606 kb on - strand, within Dsui_2614 at 2767.716 kb on + strand, within Dsui_2614 at 2767.764 kb on - strand, within Dsui_2614 at 2767.948 kb on - strand, within Dsui_2614 at 2767.985 kb on + strand at 2768.093 kb on + strand at 2768.185 kb on - strand at 2768.187 kb on + strand at 2768.240 kb on + strand, within Dsui_2615 at 2768.247 kb on - strand, within Dsui_2615 at 2768.247 kb on - strand, within Dsui_2615 at 2768.300 kb on + strand at 2768.467 kb on + strand, within Dsui_2615 at 2768.516 kb on + strand, within Dsui_2615 at 2768.546 kb on + strand, within Dsui_2615 at 2768.570 kb on + strand, within Dsui_2615 at 2768.570 kb on + strand, within Dsui_2615 at 2768.586 kb on + strand, within Dsui_2615 at 2768.603 kb on + strand, within Dsui_2615 at 2768.661 kb on + strand, within Dsui_2615 at 2768.674 kb on - strand, within Dsui_2615 at 2768.725 kb on + strand, within Dsui_2615 at 2768.733 kb on - strand, within Dsui_2615 at 2768.751 kb on + strand, within Dsui_2615 at 2768.751 kb on + strand, within Dsui_2615 at 2768.751 kb on + strand, within Dsui_2615 at 2768.824 kb on - strand at 2769.022 kb on - strand, within Dsui_2615 at 2769.057 kb on + strand, within Dsui_2615 at 2769.144 kb on + strand, within Dsui_2615 at 2769.160 kb on + strand, within Dsui_2615 at 2769.181 kb on + strand, within Dsui_2615 at 2769.189 kb on - strand, within Dsui_2615 at 2769.418 kb on + strand at 2769.428 kb on + strand at 2769.428 kb on + strand at 2769.428 kb on + strand at 2769.428 kb on + strand at 2769.428 kb on + strand at 2769.436 kb on - strand at 2769.436 kb on - strand at 2769.443 kb on + strand at 2769.473 kb on - strand at 2769.533 kb on + strand at 2769.533 kb on + strand at 2769.533 kb on + strand at 2769.541 kb on - strand at 2769.541 kb on - strand at 2769.552 kb on + strand at 2769.552 kb on + strand at 2769.652 kb on + strand, within Dsui_2616 at 2769.667 kb on + strand, within Dsui_2616 at 2769.701 kb on + strand, within Dsui_2616 at 2769.763 kb on - strand, within Dsui_2616 at 2769.796 kb on - strand at 2769.933 kb on + strand at 2769.983 kb on - strand at 2770.000 kb on - strand at 2770.116 kb on - strand at 2770.142 kb on + strand at 2770.161 kb on + strand at 2770.206 kb on + strand at 2770.260 kb on - strand at 2770.272 kb on - strand at 2770.340 kb on - strand at 2770.520 kb on + strand, within Dsui_2617
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 2,767,067 + +2.4 2,767,144 + -3.0 2,767,262 - -0.9 2,767,597 + Dsui_2614 0.43 +0.7 2,767,597 + Dsui_2614 0.43 -2.2 2,767,606 - Dsui_2614 0.44 -2.0 2,767,716 + Dsui_2614 0.57 -1.6 2,767,764 - Dsui_2614 0.63 -3.7 2,767,948 - Dsui_2614 0.86 -0.6 2,767,985 + +1.9 2,768,093 + -2.0 2,768,185 - +0.9 2,768,187 + -1.7 2,768,240 + Dsui_2615 0.12 +1.1 2,768,247 - Dsui_2615 0.13 -2.0 2,768,247 - Dsui_2615 0.13 -1.0 2,768,300 + -1.9 2,768,467 + Dsui_2615 0.27 -0.1 2,768,516 + Dsui_2615 0.30 -2.3 2,768,546 + Dsui_2615 0.32 -1.4 2,768,570 + Dsui_2615 0.34 -4.6 2,768,570 + Dsui_2615 0.34 -2.6 2,768,586 + Dsui_2615 0.35 +0.1 2,768,603 + Dsui_2615 0.36 -1.9 2,768,661 + Dsui_2615 0.40 +1.1 2,768,674 - Dsui_2615 0.41 +1.6 2,768,725 + Dsui_2615 0.44 -0.2 2,768,733 - Dsui_2615 0.45 -2.2 2,768,751 + Dsui_2615 0.46 -2.3 2,768,751 + Dsui_2615 0.46 -0.4 2,768,751 + Dsui_2615 0.46 -0.4 2,768,824 - -1.9 2,769,022 - Dsui_2615 0.63 -2.9 2,769,057 + Dsui_2615 0.66 -0.9 2,769,144 + Dsui_2615 0.71 -2.8 2,769,160 + Dsui_2615 0.72 -2.7 2,769,181 + Dsui_2615 0.74 +1.1 2,769,189 - Dsui_2615 0.74 -0.2 2,769,418 + -2.4 2,769,428 + -2.0 2,769,428 + -1.1 2,769,428 + -0.9 2,769,428 + -1.7 2,769,428 + -1.4 2,769,436 - -1.7 2,769,436 - +1.3 2,769,443 + -0.1 2,769,473 - -3.3 2,769,533 + -1.2 2,769,533 + -0.8 2,769,533 + -1.9 2,769,541 - -1.7 2,769,541 - +0.1 2,769,552 + -3.4 2,769,552 + -0.5 2,769,652 + Dsui_2616 0.37 -1.2 2,769,667 + Dsui_2616 0.44 -2.7 2,769,701 + Dsui_2616 0.60 -1.4 2,769,763 - Dsui_2616 0.88 -1.3 2,769,796 - -0.5 2,769,933 + -0.4 2,769,983 - -2.5 2,770,000 - -1.5 2,770,116 - -2.2 2,770,142 + -0.8 2,770,161 + -3.7 2,770,206 + -0.9 2,770,260 - +3.4 2,770,272 - -0.2 2,770,340 - +0.1 2,770,520 + Dsui_2617 0.28 -1.7
Or see this region's nucleotide sequence