Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2603 and Dsui_2604 are separated by 358 nucleotides Dsui_2604 and Dsui_2605 are separated by 28 nucleotides
Dsui_2603: Dsui_2603 - hypothetical protein, at 2,758,719 to 2,759,090
_2603
Dsui_2604: Dsui_2604 - hypothetical protein, at 2,759,449 to 2,759,643
_2604
Dsui_2605: Dsui_2605 - PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein, at 2,759,672 to 2,761,408
_2605
Position (kb)
2759
2760 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2758.475 kb on - strand at 2758.659 kb on + strand at 2758.674 kb on + strand at 2758.796 kb on + strand, within Dsui_2603 at 2758.817 kb on + strand at 2758.825 kb on - strand, within Dsui_2603 at 2758.876 kb on + strand, within Dsui_2603 at 2758.884 kb on - strand, within Dsui_2603 at 2758.930 kb on + strand, within Dsui_2603 at 2758.930 kb on + strand, within Dsui_2603 at 2758.938 kb on - strand, within Dsui_2603 at 2758.938 kb on - strand, within Dsui_2603 at 2758.938 kb on - strand, within Dsui_2603 at 2758.938 kb on - strand, within Dsui_2603 at 2758.938 kb on - strand, within Dsui_2603 at 2758.957 kb on + strand, within Dsui_2603 at 2758.957 kb on + strand, within Dsui_2603 at 2758.958 kb on + strand at 2758.985 kb on + strand, within Dsui_2603 at 2759.054 kb on - strand at 2759.079 kb on - strand at 2759.133 kb on - strand at 2759.222 kb on - strand at 2759.239 kb on - strand at 2759.239 kb on - strand at 2759.239 kb on - strand at 2759.368 kb on - strand at 2759.368 kb on - strand at 2759.453 kb on - strand at 2759.453 kb on - strand at 2759.482 kb on + strand at 2759.524 kb on - strand, within Dsui_2604 at 2759.544 kb on - strand, within Dsui_2604 at 2759.603 kb on - strand, within Dsui_2604 at 2759.603 kb on - strand, within Dsui_2604 at 2759.603 kb on - strand, within Dsui_2604 at 2759.613 kb on - strand, within Dsui_2604 at 2759.620 kb on - strand, within Dsui_2604 at 2759.622 kb on - strand, within Dsui_2604 at 2759.742 kb on - strand at 2759.778 kb on - strand at 2759.839 kb on + strand at 2759.839 kb on + strand at 2759.839 kb on + strand at 2759.847 kb on - strand, within Dsui_2605 at 2759.847 kb on - strand, within Dsui_2605 at 2759.847 kb on - strand, within Dsui_2605 at 2759.847 kb on - strand, within Dsui_2605 at 2759.847 kb on - strand, within Dsui_2605 at 2760.047 kb on + strand, within Dsui_2605 at 2760.101 kb on - strand, within Dsui_2605 at 2760.306 kb on + strand, within Dsui_2605 at 2760.384 kb on - strand, within Dsui_2605 at 2760.396 kb on - strand, within Dsui_2605 at 2760.407 kb on + strand, within Dsui_2605 at 2760.516 kb on + strand, within Dsui_2605 at 2760.550 kb on - strand, within Dsui_2605
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 2,758,475 - +2.3 2,758,659 + -0.5 2,758,674 + -2.7 2,758,796 + Dsui_2603 0.21 -0.6 2,758,817 + -2.2 2,758,825 - Dsui_2603 0.28 -0.9 2,758,876 + Dsui_2603 0.42 -1.2 2,758,884 - Dsui_2603 0.44 +0.7 2,758,930 + Dsui_2603 0.57 +0.5 2,758,930 + Dsui_2603 0.57 -1.8 2,758,938 - Dsui_2603 0.59 +1.8 2,758,938 - Dsui_2603 0.59 -0.0 2,758,938 - Dsui_2603 0.59 -0.0 2,758,938 - Dsui_2603 0.59 -1.1 2,758,938 - Dsui_2603 0.59 +1.3 2,758,957 + Dsui_2603 0.64 +0.1 2,758,957 + Dsui_2603 0.64 -2.8 2,758,958 + -2.7 2,758,985 + Dsui_2603 0.72 -2.6 2,759,054 - -2.7 2,759,079 - +0.6 2,759,133 - -0.5 2,759,222 - -1.9 2,759,239 - -0.5 2,759,239 - -3.2 2,759,239 - +0.8 2,759,368 - -2.1 2,759,368 - +2.2 2,759,453 - -2.5 2,759,453 - -1.5 2,759,482 + -0.9 2,759,524 - Dsui_2604 0.38 -1.9 2,759,544 - Dsui_2604 0.49 -2.1 2,759,603 - Dsui_2604 0.79 -0.6 2,759,603 - Dsui_2604 0.79 -2.5 2,759,603 - Dsui_2604 0.79 -1.2 2,759,613 - Dsui_2604 0.84 -1.9 2,759,620 - Dsui_2604 0.88 -0.4 2,759,622 - Dsui_2604 0.89 -0.5 2,759,742 - -3.3 2,759,778 - -0.2 2,759,839 + -3.4 2,759,839 + -2.6 2,759,839 + -1.4 2,759,847 - Dsui_2605 0.10 -1.8 2,759,847 - Dsui_2605 0.10 -1.6 2,759,847 - Dsui_2605 0.10 +1.1 2,759,847 - Dsui_2605 0.10 -0.9 2,759,847 - Dsui_2605 0.10 -2.4 2,760,047 + Dsui_2605 0.22 +0.4 2,760,101 - Dsui_2605 0.25 -1.8 2,760,306 + Dsui_2605 0.36 -2.1 2,760,384 - Dsui_2605 0.41 -1.7 2,760,396 - Dsui_2605 0.42 -0.5 2,760,407 + Dsui_2605 0.42 -0.5 2,760,516 + Dsui_2605 0.49 -0.2 2,760,550 - Dsui_2605 0.51 -1.7
Or see this region's nucleotide sequence