Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2364 and Dsui_2365 are separated by 0 nucleotides Dsui_2365 and Dsui_2366 are separated by 84 nucleotides Dsui_2366 and Dsui_2367 are separated by 101 nucleotides
Dsui_2364: Dsui_2364 - ABC-type sugar transport system, periplasmic component, at 2,513,766 to 2,514,707
_2364
Dsui_2365: Dsui_2365 - PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein, at 2,514,708 to 2,517,632
_2365
Dsui_2366: Dsui_2366 - inositol monophosphatase/fructose-1,6-bisphosphatase family protein, at 2,517,717 to 2,518,520
_2366
Dsui_2367: Dsui_2367 - RNA methyltransferase, TrmH family, group 1, at 2,518,622 to 2,519,401
_2367
Position (kb)
2514
2515
2516
2517
2518 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2513.798 kb on + strand at 2513.819 kb on + strand at 2513.821 kb on - strand at 2513.875 kb on + strand, within Dsui_2364 at 2513.877 kb on + strand, within Dsui_2364 at 2513.910 kb on + strand at 2514.031 kb on + strand at 2514.094 kb on - strand at 2514.101 kb on - strand at 2514.156 kb on + strand, within Dsui_2364 at 2514.162 kb on - strand at 2514.190 kb on - strand at 2514.271 kb on + strand, within Dsui_2364 at 2514.337 kb on + strand, within Dsui_2364 at 2514.337 kb on + strand, within Dsui_2364 at 2514.457 kb on + strand, within Dsui_2364 at 2514.457 kb on + strand, within Dsui_2364 at 2514.491 kb on - strand at 2514.520 kb on + strand, within Dsui_2364 at 2514.564 kb on + strand, within Dsui_2364 at 2514.571 kb on + strand, within Dsui_2364 at 2514.791 kb on + strand at 2514.894 kb on + strand at 2514.955 kb on + strand at 2514.963 kb on - strand at 2515.015 kb on - strand at 2515.075 kb on + strand at 2515.081 kb on - strand at 2515.083 kb on + strand, within Dsui_2365 at 2515.110 kb on + strand, within Dsui_2365 at 2515.198 kb on - strand, within Dsui_2365 at 2515.281 kb on + strand, within Dsui_2365 at 2515.361 kb on + strand, within Dsui_2365 at 2515.414 kb on - strand at 2515.468 kb on + strand, within Dsui_2365 at 2515.494 kb on - strand at 2515.593 kb on - strand at 2515.625 kb on + strand at 2515.630 kb on + strand, within Dsui_2365 at 2515.750 kb on - strand at 2515.802 kb on + strand, within Dsui_2365 at 2515.802 kb on + strand at 2515.802 kb on + strand, within Dsui_2365 at 2515.817 kb on + strand at 2515.884 kb on + strand, within Dsui_2365 at 2515.897 kb on - strand, within Dsui_2365 at 2516.032 kb on + strand, within Dsui_2365 at 2516.274 kb on + strand, within Dsui_2365 at 2516.356 kb on + strand at 2516.411 kb on - strand, within Dsui_2365 at 2516.423 kb on + strand, within Dsui_2365 at 2516.455 kb on - strand, within Dsui_2365 at 2516.479 kb on - strand, within Dsui_2365 at 2516.479 kb on - strand at 2516.479 kb on - strand, within Dsui_2365 at 2516.506 kb on - strand at 2516.711 kb on - strand, within Dsui_2365 at 2516.833 kb on - strand at 2516.930 kb on - strand at 2516.993 kb on + strand, within Dsui_2365 at 2517.276 kb on + strand, within Dsui_2365 at 2517.277 kb on + strand, within Dsui_2365 at 2517.304 kb on + strand, within Dsui_2365 at 2517.323 kb on + strand, within Dsui_2365 at 2517.350 kb on - strand at 2517.350 kb on - strand at 2517.512 kb on - strand at 2517.527 kb on + strand at 2517.535 kb on - strand at 2517.762 kb on - strand at 2517.762 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 2,513,798 + +0.7 2,513,819 + +1.9 2,513,821 - -2.9 2,513,875 + Dsui_2364 0.12 +0.5 2,513,877 + Dsui_2364 0.12 -0.0 2,513,910 + -0.8 2,514,031 + +0.8 2,514,094 - -0.0 2,514,101 - -0.6 2,514,156 + Dsui_2364 0.41 +1.5 2,514,162 - -0.8 2,514,190 - -0.8 2,514,271 + Dsui_2364 0.54 -1.2 2,514,337 + Dsui_2364 0.61 -0.1 2,514,337 + Dsui_2364 0.61 +0.1 2,514,457 + Dsui_2364 0.73 +0.4 2,514,457 + Dsui_2364 0.73 -1.7 2,514,491 - -2.0 2,514,520 + Dsui_2364 0.80 -0.5 2,514,564 + Dsui_2364 0.85 +0.7 2,514,571 + Dsui_2364 0.85 +0.7 2,514,791 + +0.5 2,514,894 + +0.1 2,514,955 + -2.9 2,514,963 - -2.8 2,515,015 - -0.8 2,515,075 + +1.5 2,515,081 - -1.8 2,515,083 + Dsui_2365 0.13 +1.6 2,515,110 + Dsui_2365 0.14 +0.3 2,515,198 - Dsui_2365 0.17 +0.8 2,515,281 + Dsui_2365 0.20 -1.6 2,515,361 + Dsui_2365 0.22 -0.0 2,515,414 - -0.8 2,515,468 + Dsui_2365 0.26 -1.2 2,515,494 - -2.0 2,515,593 - -3.0 2,515,625 + -3.0 2,515,630 + Dsui_2365 0.32 -1.0 2,515,750 - -1.2 2,515,802 + Dsui_2365 0.37 +1.0 2,515,802 + -3.0 2,515,802 + Dsui_2365 0.37 -1.6 2,515,817 + -3.3 2,515,884 + Dsui_2365 0.40 -1.1 2,515,897 - Dsui_2365 0.41 -0.5 2,516,032 + Dsui_2365 0.45 -1.8 2,516,274 + Dsui_2365 0.54 -0.1 2,516,356 + -1.7 2,516,411 - Dsui_2365 0.58 +0.6 2,516,423 + Dsui_2365 0.59 -0.3 2,516,455 - Dsui_2365 0.60 -1.6 2,516,479 - Dsui_2365 0.61 -1.9 2,516,479 - +0.8 2,516,479 - Dsui_2365 0.61 -1.6 2,516,506 - -0.1 2,516,711 - Dsui_2365 0.68 +0.1 2,516,833 - -1.2 2,516,930 - -0.5 2,516,993 + Dsui_2365 0.78 -1.4 2,517,276 + Dsui_2365 0.88 -0.8 2,517,277 + Dsui_2365 0.88 +1.8 2,517,304 + Dsui_2365 0.89 -0.5 2,517,323 + Dsui_2365 0.89 -0.5 2,517,350 - -2.5 2,517,350 - +0.4 2,517,512 - -0.0 2,517,527 + -1.0 2,517,535 - +1.0 2,517,762 - +1.6 2,517,762 - +0.7
Or see this region's nucleotide sequence